ICAM5

 

Full name: intercellular adhesion molecule 5 Alias Symbol: TLN
Type: protein-coding gene Cytoband: 19p13.2
Entrez ID: 7087 HGNC ID: HGNC:5348 Ensembl Gene: ENSG00000105376 OMIM ID: 601852
Drug and gene relationship at DGIdb

 

Expression of ICAM5:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ICAM5 7087 206906_at 0.1429 0.6378
GSE20347 ICAM5 7087 206906_at 0.1917 0.0142
GSE23400 ICAM5 7087 206906_at 0.1434 0.0009
GSE26886 ICAM5 7087 206906_at 0.6994 0.0000
GSE29001 ICAM5 7087 206906_at 0.2363 0.1890
GSE38129 ICAM5 7087 206906_at 0.2237 0.0061
GSE45670 ICAM5 7087 206906_at 0.2425 0.0357
GSE53622 ICAM5 7087 116790 0.4647 0.0000
GSE53624 ICAM5 7087 116790 0.9568 0.0000
GSE63941 ICAM5 7087 206906_at 0.4039 0.2107
GSE77861 ICAM5 7087 206906_at 0.0070 0.9630
GSE97050 ICAM5 7087 A_23_P119143 0.1144 0.5544
SRP133303 ICAM5 7087 RNAseq 1.0578 0.0182
SRP219564 ICAM5 7087 RNAseq 2.1679 0.0042
TCGA ICAM5 7087 RNAseq 2.0927 0.0000

Upregulated datasets: 3; Downregulated datasets: 0.  


 

Survival by ICAM5 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ICAM5:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ICAM5 7087 4 3 23
GSE20123 ICAM5 7087 3 1 26
GSE43470 ICAM5 7087 3 6 34
GSE46452 ICAM5 7087 47 1 11
GSE47630 ICAM5 7087 4 7 29
GSE54993 ICAM5 7087 16 3 51
GSE54994 ICAM5 7087 7 13 33
GSE60625 ICAM5 7087 9 0 2
GSE74703 ICAM5 7087 3 4 29
GSE74704 ICAM5 7087 0 1 19
TCGA ICAM5 7087 13 15 68

Total number of gains: 109; Total number of losses: 54; Total Number of normals: 325.  


 

Somatic mutations of ICAM5:

 

Generating mutation plots.

 

Highly correlated genes for ICAM5:

 

Showing top 20/660 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ICAM5CORO1C0.815868303
ICAM5FAM131B0.810821303
ICAM5TGFB30.805215303
ICAM5FARS20.767232303
ICAM5SLC39A30.759837303
ICAM5PLEKHO20.743078303
ICAM5ZNF80.742129303
ICAM5NFIL30.736485303
ICAM5HIC10.731102303
ICAM5NACC10.729634303
ICAM5ENG0.727479404
ICAM5CD1800.726448303
ICAM5LRRC550.725189303
ICAM5TPCN20.721318303
ICAM5CYTH30.720405303
ICAM5GTDC10.718958303
ICAM5KCNAB20.714621404
ICAM5RAB3A0.713969303
ICAM5SCMH10.713279303
ICAM5RAD180.708992303

For details and further investigation, click here