MAP6D1

 

Full name: MAP6 domain containing 1 Alias Symbol: FLJ12748|SL21
Type: protein-coding gene Cytoband: 3q27.1
Entrez ID: 79929 HGNC ID: HGNC:25753 Ensembl Gene: ENSG00000180834 OMIM ID: 610593
Drug and gene relationship at DGIdb

 

Expression of MAP6D1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 MAP6D1 79929 221713_s_at 0.2332 0.4429
GSE20347 MAP6D1 79929 221713_s_at 0.2003 0.0531
GSE23400 MAP6D1 79929 221713_s_at 0.0643 0.3407
GSE26886 MAP6D1 79929 221713_s_at 0.3910 0.0121
GSE29001 MAP6D1 79929 221713_s_at 0.1602 0.3764
GSE38129 MAP6D1 79929 221713_s_at 0.2201 0.0825
GSE45670 MAP6D1 79929 242838_at 0.3694 0.1659
GSE53622 MAP6D1 79929 106767 0.8738 0.0000
GSE53624 MAP6D1 79929 106767 0.8593 0.0000
GSE63941 MAP6D1 79929 221713_s_at 0.3565 0.3412
GSE77861 MAP6D1 79929 221713_s_at 0.0433 0.7796
GSE97050 MAP6D1 79929 A_23_P80839 0.3683 0.2009
SRP007169 MAP6D1 79929 RNAseq 1.8878 0.0101
SRP064894 MAP6D1 79929 RNAseq 1.3163 0.0000
SRP133303 MAP6D1 79929 RNAseq 0.6965 0.0278
SRP159526 MAP6D1 79929 RNAseq 2.0723 0.0000
SRP193095 MAP6D1 79929 RNAseq 1.0654 0.0000
SRP219564 MAP6D1 79929 RNAseq 0.3482 0.3860
TCGA MAP6D1 79929 RNAseq 0.7243 0.0000

Upregulated datasets: 4; Downregulated datasets: 0.  


 

Survival by MAP6D1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of MAP6D1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 MAP6D1 79929 25 0 5
GSE20123 MAP6D1 79929 25 0 5
GSE43470 MAP6D1 79929 24 0 19
GSE46452 MAP6D1 79929 19 1 39
GSE47630 MAP6D1 79929 27 2 11
GSE54993 MAP6D1 79929 1 19 50
GSE54994 MAP6D1 79929 41 0 12
GSE60625 MAP6D1 79929 0 6 5
GSE74703 MAP6D1 79929 20 0 16
GSE74704 MAP6D1 79929 17 0 3
TCGA MAP6D1 79929 77 0 19

Total number of gains: 276; Total number of losses: 28; Total Number of normals: 184.  


 

Somatic mutations of MAP6D1:

 

Generating mutation plots.

 

Highly correlated genes for MAP6D1:

 

Showing top 20/304 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
MAP6D1MTFP10.697957303
MAP6D1MAPK150.664409303
MAP6D1TICRR0.661707303
MAP6D1ZFPM10.656313303
MAP6D1TMEM1020.656269404
MAP6D1CSNK1E0.6418403
MAP6D1CDR2L0.636931605
MAP6D1TMEM59L0.635693404
MAP6D1ZNF6460.6334505
MAP6D1DNAJC220.631048403
MAP6D1PCSK90.630833503
MAP6D1GPR1620.626468303
MAP6D1ATG16L10.625945303
MAP6D1NR2E10.625136303
MAP6D1TSPAN100.624666303
MAP6D1BAIAP2L20.620899403
MAP6D1PHGR10.620506303
MAP6D1DPF10.61662605
MAP6D1PTCRA0.614149403
MAP6D1TUT10.611119303

For details and further investigation, click here