| Full name: nudE neurodevelopment protein 1 like 1 | Alias Symbol: NUDEL|MITAP1|NDE1L1|NDE2 | ||
| Type: protein-coding gene | Cytoband: 17p13.1 | ||
| Entrez ID: 81565 | HGNC ID: HGNC:17620 | Ensembl Gene: ENSG00000166579 | OMIM ID: 607538 |
Expression of NDEL1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | NDEL1 | 81565 | 208093_s_at | -0.2450 | 0.6051 | |
| GSE20347 | NDEL1 | 81565 | 208093_s_at | -0.3378 | 0.0112 | |
| GSE23400 | NDEL1 | 81565 | 208093_s_at | -0.2802 | 0.0008 | |
| GSE26886 | NDEL1 | 81565 | 208093_s_at | -0.3445 | 0.0612 | |
| GSE29001 | NDEL1 | 81565 | 208093_s_at | -0.2320 | 0.4371 | |
| GSE38129 | NDEL1 | 81565 | 208093_s_at | -0.2310 | 0.0410 | |
| GSE45670 | NDEL1 | 81565 | 208093_s_at | 0.1143 | 0.4838 | |
| GSE53622 | NDEL1 | 81565 | 53580 | -0.2520 | 0.0065 | |
| GSE53624 | NDEL1 | 81565 | 31683 | -0.2858 | 0.0000 | |
| GSE63941 | NDEL1 | 81565 | 208093_s_at | -0.7993 | 0.0260 | |
| GSE77861 | NDEL1 | 81565 | 208093_s_at | -0.1547 | 0.6760 | |
| GSE97050 | NDEL1 | 81565 | A_33_P3327852 | 0.0770 | 0.7312 | |
| SRP007169 | NDEL1 | 81565 | RNAseq | -1.7833 | 0.0001 | |
| SRP008496 | NDEL1 | 81565 | RNAseq | -1.4405 | 0.0000 | |
| SRP064894 | NDEL1 | 81565 | RNAseq | -0.1858 | 0.5126 | |
| SRP133303 | NDEL1 | 81565 | RNAseq | -0.2616 | 0.1398 | |
| SRP159526 | NDEL1 | 81565 | RNAseq | -0.7140 | 0.0275 | |
| SRP193095 | NDEL1 | 81565 | RNAseq | -0.5718 | 0.0018 | |
| SRP219564 | NDEL1 | 81565 | RNAseq | -0.3882 | 0.3020 | |
| TCGA | NDEL1 | 81565 | RNAseq | 0.0242 | 0.6812 |
Upregulated datasets: 0; Downregulated datasets: 2.
Survival by NDEL1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of NDEL1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | NDEL1 | 81565 | 4 | 2 | 24 | |
| GSE20123 | NDEL1 | 81565 | 4 | 3 | 23 | |
| GSE43470 | NDEL1 | 81565 | 1 | 6 | 36 | |
| GSE46452 | NDEL1 | 81565 | 34 | 1 | 24 | |
| GSE47630 | NDEL1 | 81565 | 7 | 1 | 32 | |
| GSE54993 | NDEL1 | 81565 | 4 | 3 | 63 | |
| GSE54994 | NDEL1 | 81565 | 5 | 8 | 40 | |
| GSE60625 | NDEL1 | 81565 | 4 | 0 | 7 | |
| GSE74703 | NDEL1 | 81565 | 1 | 3 | 32 | |
| GSE74704 | NDEL1 | 81565 | 2 | 1 | 17 | |
| TCGA | NDEL1 | 81565 | 18 | 20 | 58 |
Total number of gains: 84; Total number of losses: 48; Total Number of normals: 356.
Somatic mutations of NDEL1:
Generating mutation plots.
Highly correlated genes for NDEL1:
Showing top 20/427 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| NDEL1 | SCOC | 0.764411 | 3 | 0 | 3 |
| NDEL1 | KIDINS220 | 0.727161 | 3 | 0 | 3 |
| NDEL1 | STAMBP | 0.719139 | 3 | 0 | 3 |
| NDEL1 | ALG13 | 0.715567 | 3 | 0 | 3 |
| NDEL1 | TTC37 | 0.709071 | 5 | 0 | 5 |
| NDEL1 | MRVI1 | 0.703211 | 3 | 0 | 3 |
| NDEL1 | CNOT4 | 0.701872 | 3 | 0 | 3 |
| NDEL1 | FNIP1 | 0.700146 | 3 | 0 | 3 |
| NDEL1 | ZNF460 | 0.697062 | 3 | 0 | 3 |
| NDEL1 | AKIP1 | 0.693869 | 3 | 0 | 3 |
| NDEL1 | MOB3C | 0.693206 | 3 | 0 | 3 |
| NDEL1 | DPY19L3 | 0.691857 | 3 | 0 | 3 |
| NDEL1 | ITGB5 | 0.685407 | 3 | 0 | 3 |
| NDEL1 | SPIRE1 | 0.684263 | 3 | 0 | 3 |
| NDEL1 | AKAP11 | 0.684134 | 4 | 0 | 4 |
| NDEL1 | BDP1 | 0.683572 | 4 | 0 | 4 |
| NDEL1 | PVR | 0.682183 | 3 | 0 | 3 |
| NDEL1 | TK2 | 0.68105 | 3 | 0 | 3 |
| NDEL1 | SNX33 | 0.669798 | 5 | 0 | 5 |
| NDEL1 | SBF2 | 0.669609 | 4 | 0 | 4 |
For details and further investigation, click here
