NDRG4

 

Full name: NDRG family member 4 Alias Symbol: KIAA1180|SMAP-8
Type: protein-coding gene Cytoband: 16q21
Entrez ID: 65009 HGNC ID: HGNC:14466 Ensembl Gene: ENSG00000103034 OMIM ID: 614463
Drug and gene relationship at DGIdb

 

Expression of NDRG4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 NDRG4 65009 209159_s_at -0.1286 0.9267
GSE20347 NDRG4 65009 209159_s_at 0.2115 0.5767
GSE23400 NDRG4 65009 209159_s_at -0.1920 0.1736
GSE26886 NDRG4 65009 209159_s_at -0.8570 0.0458
GSE29001 NDRG4 65009 209159_s_at -0.1215 0.7183
GSE38129 NDRG4 65009 209159_s_at 0.5409 0.0731
GSE45670 NDRG4 65009 209159_s_at 0.7696 0.0191
GSE53622 NDRG4 65009 50762 -0.0997 0.5291
GSE53624 NDRG4 65009 50762 -0.2381 0.0194
GSE63941 NDRG4 65009 209159_s_at -0.7906 0.2793
GSE77861 NDRG4 65009 209159_s_at 0.6018 0.2689
GSE97050 NDRG4 65009 A_23_P140748 -0.1394 0.5912
SRP007169 NDRG4 65009 RNAseq -0.6539 0.3921
SRP008496 NDRG4 65009 RNAseq 0.2097 0.6859
SRP064894 NDRG4 65009 RNAseq 0.2296 0.5871
SRP133303 NDRG4 65009 RNAseq -0.7181 0.0747
SRP159526 NDRG4 65009 RNAseq 0.4502 0.4578
SRP193095 NDRG4 65009 RNAseq 0.0762 0.8177
SRP219564 NDRG4 65009 RNAseq -0.7356 0.2590
TCGA NDRG4 65009 RNAseq 0.4614 0.0090

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by NDRG4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of NDRG4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 NDRG4 65009 7 0 23
GSE20123 NDRG4 65009 7 0 23
GSE43470 NDRG4 65009 2 7 34
GSE46452 NDRG4 65009 38 1 20
GSE47630 NDRG4 65009 10 8 22
GSE54993 NDRG4 65009 2 4 64
GSE54994 NDRG4 65009 6 10 37
GSE60625 NDRG4 65009 4 0 7
GSE74703 NDRG4 65009 2 5 29
GSE74704 NDRG4 65009 5 0 15
TCGA NDRG4 65009 26 11 59

Total number of gains: 109; Total number of losses: 46; Total Number of normals: 333.  


 

Somatic mutations of NDRG4:

 

Generating mutation plots.

 

Highly correlated genes for NDRG4:

 

Showing top 20/95 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
NDRG4NIT10.686432303
NDRG4ZMAT20.662912303
NDRG4RNF1810.63675303
NDRG4STK250.634829303
NDRG4STX30.619997403
NDRG4CCNE10.615473303
NDRG4SUCLG10.614549303
NDRG4ELOVL40.614313403
NDRG4SCFD10.602347303
NDRG4LDHD0.600977303
NDRG4ANKZF10.59664303
NDRG4SLC4A1AP0.595572303
NDRG4PELI10.595156303
NDRG4IGSF30.593366403
NDRG4FAM192A0.592639303
NDRG4WFDC120.592234403
NDRG4DOLK0.589253504
NDRG4AFG3L20.588716404
NDRG4CCNYL10.585721303
NDRG4CAMKMT0.578739303

For details and further investigation, click here