NF2

 

Full name: neurofibromin 2 Alias Symbol: merlin|ACN|SCH|BANF
Type: protein-coding gene Cytoband: 22q12.2
Entrez ID: 4771 HGNC ID: HGNC:7773 Ensembl Gene: ENSG00000186575 OMIM ID: 607379
Drug and gene relationship at DGIdb
Screen Evidence:
  • This gene has been idenfitied as a common driver in this paper.
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

NF2 involved pathways:

KEGG pathway Description View
hsa04390Hippo signaling pathway

 

Expression of NF2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 NF2 4771 218915_at 0.4758 0.2333
GSE20347 NF2 4771 218915_at -0.3927 0.0004
GSE23400 NF2 4771 218915_at -0.0757 0.1205
GSE26886 NF2 4771 218915_at -0.1528 0.3601
GSE29001 NF2 4771 218915_at -0.2486 0.3176
GSE38129 NF2 4771 218915_at -0.2937 0.0003
GSE45670 NF2 4771 218915_at 0.0911 0.7048
GSE53622 NF2 4771 122523 0.1372 0.0252
GSE53624 NF2 4771 122523 -0.0923 0.2383
GSE63941 NF2 4771 218915_at -0.5676 0.1933
GSE77861 NF2 4771 218915_at 0.0196 0.9267
GSE97050 NF2 4771 A_24_P168726 -0.0496 0.8915
SRP007169 NF2 4771 RNAseq -0.4148 0.2634
SRP008496 NF2 4771 RNAseq -0.1126 0.6878
SRP064894 NF2 4771 RNAseq 0.1371 0.3843
SRP133303 NF2 4771 RNAseq -0.0885 0.5006
SRP159526 NF2 4771 RNAseq 0.1616 0.4812
SRP193095 NF2 4771 RNAseq 0.0274 0.7990
SRP219564 NF2 4771 RNAseq 0.1975 0.4447
TCGA NF2 4771 RNAseq -0.0439 0.3765

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by NF2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of NF2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 NF2 4771 3 5 22
GSE20123 NF2 4771 3 4 23
GSE43470 NF2 4771 4 5 34
GSE46452 NF2 4771 31 1 27
GSE47630 NF2 4771 8 5 27
GSE54993 NF2 4771 3 6 61
GSE54994 NF2 4771 11 8 34
GSE60625 NF2 4771 5 0 6
GSE74703 NF2 4771 4 4 28
GSE74704 NF2 4771 0 1 19
TCGA NF2 4771 27 15 54

Total number of gains: 99; Total number of losses: 54; Total Number of normals: 335.  


 

Somatic mutations of NF2:

 

Generating mutation plots.

 

Highly correlated genes for NF2:

 

Showing top 20/158 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
NF2ANKRD650.822946303
NF2TATDN20.806509303
NF2PREB0.775401303
NF2ZC3H7B0.762769303
NF2STK350.761985303
NF2CELA3A0.760626303
NF2SLC26A50.760377303
NF2TOR1A0.749208303
NF2GFAP0.740545303
NF2TMEM63B0.735286403
NF2SMAD10.73375303
NF2MTCH20.732546303
NF2SPEG0.723898303
NF2KIR3DL20.714485303
NF2SFTPA20.71373303
NF2CYP26C10.710299303
NF2ZNF4190.707716303
NF2BARHL10.702234303
NF2ALG110.701038303
NF2OR2T330.698434404

For details and further investigation, click here