NIPA1

 

Full name: NIPA magnesium transporter 1 Alias Symbol: MGC35570|SLC57A1
Type: protein-coding gene Cytoband: 15q11.2
Entrez ID: 123606 HGNC ID: HGNC:17043 Ensembl Gene: ENSG00000170113 OMIM ID: 608145
Drug and gene relationship at DGIdb

 

Expression of NIPA1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 NIPA1 123606 225752_at 0.6550 0.3815
GSE26886 NIPA1 123606 225752_at 0.6693 0.0069
GSE45670 NIPA1 123606 225752_at 0.3521 0.0279
GSE53622 NIPA1 123606 134851 0.2832 0.0050
GSE53624 NIPA1 123606 134851 0.4200 0.0000
GSE63941 NIPA1 123606 225752_at 0.2402 0.6426
GSE77861 NIPA1 123606 225752_at 1.2603 0.0008
GSE97050 NIPA1 123606 A_33_P3250840 -0.1507 0.4921
SRP007169 NIPA1 123606 RNAseq 2.0699 0.0002
SRP008496 NIPA1 123606 RNAseq 1.4199 0.0002
SRP064894 NIPA1 123606 RNAseq 0.6888 0.0226
SRP133303 NIPA1 123606 RNAseq 0.7542 0.0005
SRP159526 NIPA1 123606 RNAseq 0.5658 0.2260
SRP193095 NIPA1 123606 RNAseq 0.3007 0.0759
SRP219564 NIPA1 123606 RNAseq -0.0300 0.9208
TCGA NIPA1 123606 RNAseq -0.0985 0.1031

Upregulated datasets: 3; Downregulated datasets: 0.  


 

Survival by NIPA1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of NIPA1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 NIPA1 123606 4 4 22
GSE20123 NIPA1 123606 3 4 23
GSE43470 NIPA1 123606 2 5 36
GSE46452 NIPA1 123606 3 7 49
GSE47630 NIPA1 123606 8 11 21
GSE54993 NIPA1 123606 4 6 60
GSE54994 NIPA1 123606 6 6 41
GSE60625 NIPA1 123606 4 3 4
GSE74703 NIPA1 123606 2 3 31
GSE74704 NIPA1 123606 2 4 14
TCGA NIPA1 123606 18 19 59

Total number of gains: 56; Total number of losses: 72; Total Number of normals: 360.  


 

Somatic mutations of NIPA1:

 

Generating mutation plots.

 

Highly correlated genes for NIPA1:

 

Showing top 20/750 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
NIPA1ILF30.835913303
NIPA1CPT1A0.797464303
NIPA1OAZ20.786293303
NIPA1UBE2Z0.778677404
NIPA1HSF20.777935303
NIPA1USP140.763664303
NIPA1HMG20B0.763581303
NIPA1EXOSC60.7632303
NIPA1PHB0.760836404
NIPA1TERF20.757784303
NIPA1FUS0.7568303
NIPA1CCT40.75171404
NIPA1COMMD20.738609303
NIPA1PDPR0.738581303
NIPA1GNPDA10.736998303
NIPA1AMZ20.731756404
NIPA1NUDT150.728601303
NIPA1TRMT61B0.728495404
NIPA1NUDT110.726602303
NIPA1TEX100.724765303

For details and further investigation, click here