Full name: neurotrophin 3 | Alias Symbol: NGF2 | ||
Type: protein-coding gene | Cytoband: 12p13.31 | ||
Entrez ID: 4908 | HGNC ID: HGNC:8023 | Ensembl Gene: ENSG00000185652 | OMIM ID: 162660 |
Drug and gene relationship at DGIdb |
NTF3 involved pathways:
KEGG pathway | Description | View |
---|---|---|
hsa04010 | MAPK signaling pathway | |
hsa04722 | Neurotrophin signaling pathway |
Expression of NTF3:
Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
---|---|---|---|---|---|---|
GSE17351 | NTF3 | 4908 | 206706_at | -0.6035 | 0.1185 | |
GSE20347 | NTF3 | 4908 | 206706_at | -0.2152 | 0.1723 | |
GSE23400 | NTF3 | 4908 | 206706_at | -0.1343 | 0.0021 | |
GSE26886 | NTF3 | 4908 | 206706_at | 0.0447 | 0.9170 | |
GSE29001 | NTF3 | 4908 | 206706_at | -0.0837 | 0.8082 | |
GSE38129 | NTF3 | 4908 | 206706_at | -0.3833 | 0.0048 | |
GSE45670 | NTF3 | 4908 | 206706_at | -0.5193 | 0.0007 | |
GSE53622 | NTF3 | 4908 | 162109 | -0.5475 | 0.0000 | |
GSE53624 | NTF3 | 4908 | 162109 | -0.7566 | 0.0000 | |
GSE63941 | NTF3 | 4908 | 206706_at | 0.4408 | 0.6078 | |
GSE77861 | NTF3 | 4908 | 206706_at | 0.1255 | 0.5157 | |
GSE97050 | NTF3 | 4908 | A_23_P360797 | -0.1223 | 0.7777 | |
SRP064894 | NTF3 | 4908 | RNAseq | -1.5402 | 0.0006 | |
SRP133303 | NTF3 | 4908 | RNAseq | -2.5115 | 0.0000 | |
SRP159526 | NTF3 | 4908 | RNAseq | -0.2129 | 0.7663 | |
TCGA | NTF3 | 4908 | RNAseq | -0.8074 | 0.0694 |
Upregulated datasets: 0; Downregulated datasets: 2.
Survival by NTF3 expression:
Note: Click image to view full size file.
Copy number change of NTF3:
Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
---|---|---|---|---|---|---|
GSE15526 | NTF3 | 4908 | 6 | 4 | 20 | |
GSE20123 | NTF3 | 4908 | 6 | 4 | 20 | |
GSE43470 | NTF3 | 4908 | 9 | 3 | 31 | |
GSE46452 | NTF3 | 4908 | 10 | 1 | 48 | |
GSE47630 | NTF3 | 4908 | 12 | 2 | 26 | |
GSE54993 | NTF3 | 4908 | 1 | 10 | 59 | |
GSE54994 | NTF3 | 4908 | 10 | 2 | 41 | |
GSE60625 | NTF3 | 4908 | 0 | 1 | 10 | |
GSE74703 | NTF3 | 4908 | 8 | 2 | 26 | |
GSE74704 | NTF3 | 4908 | 4 | 2 | 14 | |
TCGA | NTF3 | 4908 | 40 | 6 | 50 |
Total number of gains: 106; Total number of losses: 37; Total Number of normals: 345.
Somatic mutations of NTF3:
Generating mutation plots.
Highly correlated genes for NTF3:
Showing top 20/71 corelated genes with mean PCC>0.5.
Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
---|---|---|---|---|---|
NTF3 | FAM71F1 | 0.732501 | 3 | 0 | 3 |
NTF3 | LINC00924 | 0.679222 | 3 | 0 | 3 |
NTF3 | PHF21B | 0.673612 | 3 | 0 | 3 |
NTF3 | IGSF22 | 0.639632 | 3 | 0 | 3 |
NTF3 | CTTNBP2 | 0.639591 | 5 | 0 | 5 |
NTF3 | SHROOM4 | 0.63958 | 4 | 0 | 3 |
NTF3 | GRIK5 | 0.637684 | 3 | 0 | 3 |
NTF3 | RANBP3 | 0.633389 | 3 | 0 | 3 |
NTF3 | KIAA1671 | 0.627968 | 3 | 0 | 3 |
NTF3 | CDK5R2 | 0.626137 | 3 | 0 | 3 |
NTF3 | CNTN4 | 0.621096 | 3 | 0 | 3 |
NTF3 | ADAP1 | 0.620511 | 4 | 0 | 3 |
NTF3 | ZNF763 | 0.613823 | 3 | 0 | 3 |
NTF3 | C16orf89 | 0.613068 | 4 | 0 | 3 |
NTF3 | WDR6 | 0.606905 | 4 | 0 | 3 |
NTF3 | BRAF | 0.605637 | 4 | 0 | 3 |
NTF3 | IRX1 | 0.60464 | 3 | 0 | 3 |
NTF3 | LRRC2 | 0.602689 | 4 | 0 | 3 |
NTF3 | LDB2 | 0.602532 | 4 | 0 | 3 |
NTF3 | SLC22A14 | 0.601292 | 5 | 0 | 4 |
For details and further investigation, click here