| Full name: RAN binding protein 3 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 19p13.3 | ||
| Entrez ID: 8498 | HGNC ID: HGNC:9850 | Ensembl Gene: ENSG00000031823 | OMIM ID: 603327 |
| Drug and gene relationship at DGIdb | |||
Screen Evidence:
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Expression of RANBP3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RANBP3 | 8498 | 202640_s_at | 0.0799 | 0.8739 | |
| GSE20347 | RANBP3 | 8498 | 202640_s_at | 0.1429 | 0.2317 | |
| GSE23400 | RANBP3 | 8498 | 202639_s_at | -0.0505 | 0.1999 | |
| GSE26886 | RANBP3 | 8498 | 202640_s_at | 0.8337 | 0.0000 | |
| GSE29001 | RANBP3 | 8498 | 202640_s_at | 0.1454 | 0.4830 | |
| GSE38129 | RANBP3 | 8498 | 202640_s_at | -0.0223 | 0.8781 | |
| GSE45670 | RANBP3 | 8498 | 202640_s_at | 0.0138 | 0.9055 | |
| GSE53622 | RANBP3 | 8498 | 59802 | -0.1260 | 0.0045 | |
| GSE53624 | RANBP3 | 8498 | 106613 | 0.0581 | 0.1740 | |
| GSE63941 | RANBP3 | 8498 | 202639_s_at | 0.6989 | 0.0101 | |
| GSE77861 | RANBP3 | 8498 | 202639_s_at | 0.1996 | 0.1857 | |
| GSE97050 | RANBP3 | 8498 | A_33_P3368375 | -0.1717 | 0.4995 | |
| SRP007169 | RANBP3 | 8498 | RNAseq | -0.0687 | 0.8298 | |
| SRP008496 | RANBP3 | 8498 | RNAseq | 0.1254 | 0.5571 | |
| SRP064894 | RANBP3 | 8498 | RNAseq | 0.2885 | 0.0593 | |
| SRP133303 | RANBP3 | 8498 | RNAseq | 0.0482 | 0.7940 | |
| SRP159526 | RANBP3 | 8498 | RNAseq | 0.2283 | 0.2043 | |
| SRP193095 | RANBP3 | 8498 | RNAseq | 0.2591 | 0.0019 | |
| SRP219564 | RANBP3 | 8498 | RNAseq | 0.0749 | 0.8509 | |
| TCGA | RANBP3 | 8498 | RNAseq | -0.0175 | 0.7042 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by RANBP3 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RANBP3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RANBP3 | 8498 | 5 | 3 | 22 | |
| GSE20123 | RANBP3 | 8498 | 4 | 2 | 24 | |
| GSE43470 | RANBP3 | 8498 | 2 | 6 | 35 | |
| GSE46452 | RANBP3 | 8498 | 47 | 1 | 11 | |
| GSE47630 | RANBP3 | 8498 | 5 | 7 | 28 | |
| GSE54993 | RANBP3 | 8498 | 16 | 3 | 51 | |
| GSE54994 | RANBP3 | 8498 | 6 | 16 | 31 | |
| GSE60625 | RANBP3 | 8498 | 9 | 0 | 2 | |
| GSE74703 | RANBP3 | 8498 | 2 | 4 | 30 | |
| GSE74704 | RANBP3 | 8498 | 1 | 2 | 17 | |
| TCGA | RANBP3 | 8498 | 9 | 18 | 69 |
Total number of gains: 106; Total number of losses: 62; Total Number of normals: 320.
Somatic mutations of RANBP3:
Generating mutation plots.
Highly correlated genes for RANBP3:
Showing top 20/211 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RANBP3 | LENG1 | 0.780136 | 3 | 0 | 3 |
| RANBP3 | CABP1 | 0.752908 | 3 | 0 | 3 |
| RANBP3 | LRRC4 | 0.728287 | 3 | 0 | 3 |
| RANBP3 | ASPDH | 0.719095 | 3 | 0 | 3 |
| RANBP3 | CHP2 | 0.706168 | 4 | 0 | 4 |
| RANBP3 | CPAMD8 | 0.704883 | 3 | 0 | 3 |
| RANBP3 | WDR83 | 0.694203 | 4 | 0 | 3 |
| RANBP3 | CDX2 | 0.684418 | 4 | 0 | 4 |
| RANBP3 | ZNF133 | 0.68033 | 3 | 0 | 3 |
| RANBP3 | ENDOV | 0.678094 | 3 | 0 | 3 |
| RANBP3 | EBF4 | 0.677717 | 3 | 0 | 3 |
| RANBP3 | CMSS1 | 0.67718 | 3 | 0 | 3 |
| RANBP3 | CCDC130 | 0.677134 | 8 | 0 | 8 |
| RANBP3 | ABT1 | 0.676978 | 3 | 0 | 3 |
| RANBP3 | DPF1 | 0.676126 | 4 | 0 | 3 |
| RANBP3 | CEMP1 | 0.672293 | 3 | 0 | 3 |
| RANBP3 | MRPS2 | 0.67138 | 5 | 0 | 5 |
| RANBP3 | MIIP | 0.668708 | 6 | 0 | 4 |
| RANBP3 | SIRT6 | 0.666414 | 4 | 0 | 3 |
| RANBP3 | TUT1 | 0.666412 | 4 | 0 | 3 |
For details and further investigation, click here
