OCA2

 

Full name: OCA2 melanosomal transmembrane protein Alias Symbol: BEY2|EYCL|BEY|BEY1
Type: protein-coding gene Cytoband: 15q12-q13.1
Entrez ID: 4948 HGNC ID: HGNC:8101 Ensembl Gene: ENSG00000104044 OMIM ID: 611409
Drug and gene relationship at DGIdb

 

Expression of OCA2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 OCA2 4948 206498_at -0.7649 0.0725
GSE20347 OCA2 4948 206498_at -0.5932 0.0200
GSE23400 OCA2 4948 206498_at -0.2755 0.0000
GSE26886 OCA2 4948 206498_at -1.5574 0.0000
GSE29001 OCA2 4948 206498_at -0.8981 0.0601
GSE38129 OCA2 4948 206498_at -0.4048 0.1020
GSE45670 OCA2 4948 206498_at -0.8447 0.0116
GSE53622 OCA2 4948 102162 -1.1986 0.0000
GSE53624 OCA2 4948 91207 -2.9002 0.0000
GSE63941 OCA2 4948 206498_at 0.4394 0.0016
GSE77861 OCA2 4948 206498_at -0.4861 0.0523
SRP064894 OCA2 4948 RNAseq -2.4959 0.0000
SRP133303 OCA2 4948 RNAseq -3.2131 0.0000
SRP159526 OCA2 4948 RNAseq -0.4070 0.6426
TCGA OCA2 4948 RNAseq 0.8573 0.2230

Upregulated datasets: 0; Downregulated datasets: 5.  


 

Survival by OCA2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of OCA2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 OCA2 4948 3 7 20
GSE20123 OCA2 4948 3 7 20
GSE43470 OCA2 4948 4 5 34
GSE46452 OCA2 4948 3 7 49
GSE47630 OCA2 4948 8 11 21
GSE54993 OCA2 4948 4 6 60
GSE54994 OCA2 4948 7 6 40
GSE60625 OCA2 4948 4 0 7
GSE74703 OCA2 4948 4 3 29
GSE74704 OCA2 4948 2 5 13
TCGA OCA2 4948 16 17 63

Total number of gains: 58; Total number of losses: 74; Total Number of normals: 356.  


 

Somatic mutations of OCA2:

 

Generating mutation plots.

 

Highly correlated genes for OCA2:

 

Showing top 20/719 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
OCA2SAMD50.725909606
OCA2SH3BGRL20.708462606
OCA2SPNS20.701397404
OCA2TMPRSS11B0.699944606
OCA2ASPG0.696334505
OCA2SFTA20.689232404
OCA2SNORA680.686983404
OCA2KRT780.685488606
OCA2A2ML10.685409606
OCA2FAM3D0.684722606
OCA2VSIG10L0.68406606
OCA2PAQR80.677129606
OCA2PLAC90.673407403
OCA2CYSRT10.670058606
OCA2DMKN0.669489303
OCA2MAB21L30.668644504
OCA2SPAG170.667785404
OCA2PCBP1-AS10.667674404
OCA2FAM214A0.666267605
OCA2SLC46A20.663572606

For details and further investigation, click here