| Full name: sterile alpha motif domain containing 5 | Alias Symbol: dJ875H10.1 | ||
| Type: protein-coding gene | Cytoband: 6q24.3 | ||
| Entrez ID: 389432 | HGNC ID: HGNC:21180 | Ensembl Gene: ENSG00000203727 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of SAMD5:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SAMD5 | 389432 | 228653_at | -3.2506 | 0.0202 | |
| GSE26886 | SAMD5 | 389432 | 228653_at | -3.8035 | 0.0000 | |
| GSE45670 | SAMD5 | 389432 | 228653_at | -2.2969 | 0.0002 | |
| GSE53622 | SAMD5 | 389432 | 16355 | -2.8223 | 0.0000 | |
| GSE53624 | SAMD5 | 389432 | 16355 | -3.4430 | 0.0000 | |
| GSE63941 | SAMD5 | 389432 | 228653_at | -1.7603 | 0.1480 | |
| GSE77861 | SAMD5 | 389432 | 228653_at | -2.1449 | 0.0055 | |
| GSE97050 | SAMD5 | 389432 | A_24_P602871 | -1.5415 | 0.1705 | |
| SRP007169 | SAMD5 | 389432 | RNAseq | -2.4900 | 0.0046 | |
| SRP008496 | SAMD5 | 389432 | RNAseq | -2.7308 | 0.0020 | |
| SRP064894 | SAMD5 | 389432 | RNAseq | -3.0983 | 0.0000 | |
| SRP133303 | SAMD5 | 389432 | RNAseq | -2.9463 | 0.0000 | |
| SRP159526 | SAMD5 | 389432 | RNAseq | -1.9189 | 0.0001 | |
| SRP193095 | SAMD5 | 389432 | RNAseq | -2.0297 | 0.0000 | |
| SRP219564 | SAMD5 | 389432 | RNAseq | -2.0584 | 0.0101 | |
| TCGA | SAMD5 | 389432 | RNAseq | -0.7307 | 0.0060 |
Upregulated datasets: 0; Downregulated datasets: 13.
Survival by SAMD5 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SAMD5:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SAMD5 | 389432 | 2 | 4 | 24 | |
| GSE20123 | SAMD5 | 389432 | 2 | 3 | 25 | |
| GSE43470 | SAMD5 | 389432 | 5 | 0 | 38 | |
| GSE46452 | SAMD5 | 389432 | 3 | 10 | 46 | |
| GSE47630 | SAMD5 | 389432 | 9 | 4 | 27 | |
| GSE54993 | SAMD5 | 389432 | 3 | 2 | 65 | |
| GSE54994 | SAMD5 | 389432 | 8 | 8 | 37 | |
| GSE60625 | SAMD5 | 389432 | 0 | 1 | 10 | |
| GSE74703 | SAMD5 | 389432 | 4 | 0 | 32 | |
| GSE74704 | SAMD5 | 389432 | 0 | 1 | 19 | |
| TCGA | SAMD5 | 389432 | 13 | 20 | 63 |
Total number of gains: 49; Total number of losses: 53; Total Number of normals: 386.
Somatic mutations of SAMD5:
Generating mutation plots.
Highly correlated genes for SAMD5:
Showing top 20/1566 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SAMD5 | GYS2 | 0.873613 | 6 | 0 | 6 |
| SAMD5 | SH3BGRL2 | 0.873352 | 7 | 0 | 7 |
| SAMD5 | EHD3 | 0.870223 | 7 | 0 | 7 |
| SAMD5 | SLC16A6 | 0.859335 | 7 | 0 | 7 |
| SAMD5 | SFTA2 | 0.85796 | 4 | 0 | 4 |
| SAMD5 | PTN | 0.857641 | 5 | 0 | 5 |
| SAMD5 | SASH1 | 0.85525 | 7 | 0 | 7 |
| SAMD5 | CTTNBP2 | 0.851998 | 6 | 0 | 6 |
| SAMD5 | TP53I3 | 0.843418 | 7 | 0 | 7 |
| SAMD5 | CAPN5 | 0.842431 | 7 | 0 | 7 |
| SAMD5 | KRT78 | 0.837339 | 7 | 0 | 7 |
| SAMD5 | UBL3 | 0.837222 | 7 | 0 | 7 |
| SAMD5 | PMM1 | 0.835497 | 6 | 0 | 6 |
| SAMD5 | FAM3D | 0.830387 | 7 | 0 | 7 |
| SAMD5 | ALDH9A1 | 0.828871 | 7 | 0 | 7 |
| SAMD5 | CRISP3 | 0.827945 | 7 | 0 | 7 |
| SAMD5 | SCIN | 0.82774 | 7 | 0 | 7 |
| SAMD5 | MAPK3 | 0.826771 | 7 | 0 | 7 |
| SAMD5 | NAGK | 0.822616 | 7 | 0 | 7 |
| SAMD5 | HCG22 | 0.822427 | 6 | 0 | 6 |
For details and further investigation, click here
