| Full name: PCOLCE antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 7q22.1 | ||
| Entrez ID: 100129845 | HGNC ID: HGNC:40430 | Ensembl Gene: ENSG00000224729 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of PCOLCE-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | PCOLCE-AS1 | 100129845 | 1560939_at | 0.0694 | 0.7927 | |
| GSE26886 | PCOLCE-AS1 | 100129845 | 1560939_at | -0.0847 | 0.4308 | |
| GSE45670 | PCOLCE-AS1 | 100129845 | 1560939_at | 0.0652 | 0.5111 | |
| GSE63941 | PCOLCE-AS1 | 100129845 | 1560939_at | 0.2118 | 0.0837 | |
| GSE77861 | PCOLCE-AS1 | 100129845 | 1560939_at | -0.0298 | 0.7458 |
Upregulated datasets: 0; Downregulated datasets: 0.
Copy number change of PCOLCE-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | PCOLCE-AS1 | 100129845 | 13 | 0 | 17 | |
| GSE20123 | PCOLCE-AS1 | 100129845 | 13 | 0 | 17 | |
| GSE43470 | PCOLCE-AS1 | 100129845 | 7 | 2 | 34 | |
| GSE46452 | PCOLCE-AS1 | 100129845 | 11 | 1 | 47 | |
| GSE47630 | PCOLCE-AS1 | 100129845 | 7 | 3 | 30 | |
| GSE54993 | PCOLCE-AS1 | 100129845 | 1 | 9 | 60 | |
| GSE54994 | PCOLCE-AS1 | 100129845 | 16 | 3 | 34 | |
| GSE60625 | PCOLCE-AS1 | 100129845 | 0 | 0 | 11 | |
| GSE74703 | PCOLCE-AS1 | 100129845 | 7 | 1 | 28 | |
| GSE74704 | PCOLCE-AS1 | 100129845 | 9 | 0 | 11 |
Total number of gains: 84; Total number of losses: 19; Total Number of normals: 289.
Somatic mutations of PCOLCE-AS1:
Generating mutation plots.
Highly correlated genes for PCOLCE-AS1:
Showing top 20/41 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| PCOLCE-AS1 | SNAP25 | 0.632704 | 3 | 0 | 3 |
| PCOLCE-AS1 | GPR62 | 0.611752 | 3 | 0 | 3 |
| PCOLCE-AS1 | STAU2-AS1 | 0.611349 | 4 | 0 | 3 |
| PCOLCE-AS1 | MMP8 | 0.594338 | 3 | 0 | 3 |
| PCOLCE-AS1 | CASC17 | 0.593766 | 3 | 0 | 3 |
| PCOLCE-AS1 | MPV17L | 0.592364 | 4 | 0 | 4 |
| PCOLCE-AS1 | AQP9 | 0.591088 | 3 | 0 | 3 |
| PCOLCE-AS1 | GSX1 | 0.588093 | 3 | 0 | 3 |
| PCOLCE-AS1 | ASCL1 | 0.578615 | 3 | 0 | 3 |
| PCOLCE-AS1 | NPAS3 | 0.578084 | 3 | 0 | 3 |
| PCOLCE-AS1 | SLFNL1 | 0.577396 | 3 | 0 | 3 |
| PCOLCE-AS1 | TNFRSF13C | 0.572355 | 3 | 0 | 3 |
| PCOLCE-AS1 | CACNG4 | 0.571053 | 4 | 0 | 4 |
| PCOLCE-AS1 | MYPN | 0.570022 | 4 | 0 | 3 |
| PCOLCE-AS1 | PRRX2-AS1 | 0.569302 | 3 | 0 | 3 |
| PCOLCE-AS1 | LILRA6 | 0.566941 | 4 | 0 | 3 |
| PCOLCE-AS1 | KIR2DS1 | 0.566789 | 5 | 0 | 3 |
| PCOLCE-AS1 | HNF1B | 0.566776 | 4 | 0 | 3 |
| PCOLCE-AS1 | ANHX | 0.564913 | 5 | 0 | 3 |
| PCOLCE-AS1 | KLK3 | 0.561367 | 3 | 0 | 3 |
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