KATNAL1

 

Full name: katanin catalytic subunit A1 like 1 Alias Symbol: MGC2599
Type: protein-coding gene Cytoband: 13q12.3
Entrez ID: 84056 HGNC ID: HGNC:28361 Ensembl Gene: ENSG00000102781 OMIM ID: 614764
Drug and gene relationship at DGIdb

 

Expression of KATNAL1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 KATNAL1 84056 227713_at -0.4001 0.6359
GSE26886 KATNAL1 84056 227713_at 1.0635 0.0000
GSE45670 KATNAL1 84056 227713_at -0.6468 0.0109
GSE53622 KATNAL1 84056 84631 -0.3334 0.0098
GSE53624 KATNAL1 84056 84631 0.1959 0.0231
GSE63941 KATNAL1 84056 227713_at -1.8458 0.0238
GSE77861 KATNAL1 84056 227713_at 0.3402 0.4450
GSE97050 KATNAL1 84056 A_32_P75284 -0.6508 0.1782
SRP007169 KATNAL1 84056 RNAseq 1.5707 0.0040
SRP008496 KATNAL1 84056 RNAseq 1.3747 0.0003
SRP064894 KATNAL1 84056 RNAseq 0.6015 0.0013
SRP133303 KATNAL1 84056 RNAseq 0.4218 0.0342
SRP159526 KATNAL1 84056 RNAseq -0.0278 0.9277
SRP193095 KATNAL1 84056 RNAseq 0.7915 0.0000
SRP219564 KATNAL1 84056 RNAseq -0.4388 0.4256
TCGA KATNAL1 84056 RNAseq 0.0749 0.4452

Upregulated datasets: 3; Downregulated datasets: 1.  


 

Survival by KATNAL1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of KATNAL1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 KATNAL1 84056 1 13 16
GSE20123 KATNAL1 84056 1 12 17
GSE43470 KATNAL1 84056 2 12 29
GSE46452 KATNAL1 84056 0 33 26
GSE47630 KATNAL1 84056 2 27 11
GSE54993 KATNAL1 84056 12 2 56
GSE54994 KATNAL1 84056 2 14 37
GSE60625 KATNAL1 84056 0 3 8
GSE74703 KATNAL1 84056 2 9 25
GSE74704 KATNAL1 84056 0 10 10
TCGA KATNAL1 84056 8 37 51

Total number of gains: 30; Total number of losses: 172; Total Number of normals: 286.  


 

Somatic mutations of KATNAL1:

 

Generating mutation plots.

 

Highly correlated genes for KATNAL1:

 

Showing top 20/886 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
KATNAL1GIPC30.79206303
KATNAL1PURA0.783056303
KATNAL1PRKG20.780346303
KATNAL1PLA2G50.776168303
KATNAL1PDZD40.77328303
KATNAL1STK330.761896303
KATNAL1SGCA0.761623404
KATNAL1MAP40.74646303
KATNAL1KIF5C0.741553404
KATNAL1STARD90.741366505
KATNAL1SYNC0.736381404
KATNAL1DPYSL30.731005606
KATNAL1ACTN20.728811303
KATNAL1IQUB0.725617403
KATNAL1LRRTM10.725368303
KATNAL1APBB10.722285404
KATNAL1CADM20.717465303
KATNAL1RBM240.715435605
KATNAL1TNIK0.715242404
KATNAL1ZNF385D0.715185403

For details and further investigation, click here