| Full name: piggyBac transposable element derived 2 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 1q | ||
| Entrez ID: 267002 | HGNC ID: HGNC:19399 | Ensembl Gene: ENSG00000185220 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of PGBD2:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | PGBD2 | 267002 | 238004_at | 0.2320 | 0.5853 | |
| GSE26886 | PGBD2 | 267002 | 238004_at | -0.2464 | 0.4044 | |
| GSE45670 | PGBD2 | 267002 | 238004_at | 0.3013 | 0.0180 | |
| GSE53622 | PGBD2 | 267002 | 22821 | -0.0470 | 0.4541 | |
| GSE53624 | PGBD2 | 267002 | 22821 | -0.0424 | 0.5509 | |
| GSE63941 | PGBD2 | 267002 | 238004_at | 0.0705 | 0.8521 | |
| GSE77861 | PGBD2 | 267002 | 238004_at | -0.2694 | 0.1611 | |
| GSE97050 | PGBD2 | 267002 | A_33_P3286608 | -0.1075 | 0.7750 | |
| SRP007169 | PGBD2 | 267002 | RNAseq | 0.4078 | 0.5634 | |
| SRP064894 | PGBD2 | 267002 | RNAseq | -0.2767 | 0.1288 | |
| SRP133303 | PGBD2 | 267002 | RNAseq | -0.0144 | 0.9443 | |
| SRP159526 | PGBD2 | 267002 | RNAseq | -0.3373 | 0.3362 | |
| SRP193095 | PGBD2 | 267002 | RNAseq | -0.2545 | 0.0488 | |
| SRP219564 | PGBD2 | 267002 | RNAseq | -0.1005 | 0.8342 | |
| TCGA | PGBD2 | 267002 | RNAseq | -0.0067 | 0.9423 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by PGBD2 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of PGBD2:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | PGBD2 | 267002 | 8 | 1 | 21 | |
| GSE20123 | PGBD2 | 267002 | 7 | 1 | 22 | |
| GSE43470 | PGBD2 | 267002 | 4 | 3 | 36 | |
| GSE46452 | PGBD2 | 267002 | 4 | 2 | 53 | |
| GSE47630 | PGBD2 | 267002 | 15 | 1 | 24 | |
| GSE54993 | PGBD2 | 267002 | 0 | 6 | 64 | |
| GSE54994 | PGBD2 | 267002 | 18 | 0 | 35 | |
| GSE60625 | PGBD2 | 267002 | 0 | 0 | 11 | |
| GSE74703 | PGBD2 | 267002 | 4 | 1 | 31 | |
| GSE74704 | PGBD2 | 267002 | 2 | 0 | 18 | |
| TCGA | PGBD2 | 267002 | 45 | 4 | 47 |
Total number of gains: 107; Total number of losses: 19; Total Number of normals: 362.
Somatic mutations of PGBD2:
Generating mutation plots.
Highly correlated genes for PGBD2:
Showing top 20/41 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| PGBD2 | NAT8B | 0.748698 | 3 | 0 | 3 |
| PGBD2 | FAM24B | 0.726182 | 3 | 0 | 3 |
| PGBD2 | KLHL35 | 0.699835 | 4 | 0 | 4 |
| PGBD2 | ANKLE1 | 0.687661 | 3 | 0 | 3 |
| PGBD2 | ZNF219 | 0.681638 | 3 | 0 | 3 |
| PGBD2 | CLCNKB | 0.680376 | 3 | 0 | 3 |
| PGBD2 | ZNF524 | 0.674562 | 3 | 0 | 3 |
| PGBD2 | RTN4RL1 | 0.667745 | 3 | 0 | 3 |
| PGBD2 | BAHD1 | 0.66649 | 3 | 0 | 3 |
| PGBD2 | SYNGAP1 | 0.661417 | 3 | 0 | 3 |
| PGBD2 | GBX2 | 0.659975 | 3 | 0 | 3 |
| PGBD2 | ATAD3C | 0.654258 | 3 | 0 | 3 |
| PGBD2 | MBD6 | 0.648922 | 5 | 0 | 4 |
| PGBD2 | RASSF6 | 0.646709 | 3 | 0 | 3 |
| PGBD2 | JRK | 0.634931 | 4 | 0 | 3 |
| PGBD2 | ZNF221 | 0.625161 | 4 | 0 | 3 |
| PGBD2 | GPR27 | 0.620422 | 4 | 0 | 3 |
| PGBD2 | RXRB | 0.615824 | 4 | 0 | 3 |
| PGBD2 | IL22RA2 | 0.613481 | 5 | 0 | 3 |
| PGBD2 | PARD6A | 0.612847 | 3 | 0 | 3 |
For details and further investigation, click here
