| Full name: PHD finger protein 21A | Alias Symbol: BHC80|KIAA1696|BM-006 | ||
| Type: protein-coding gene | Cytoband: 11p11.2 | ||
| Entrez ID: 51317 | HGNC ID: HGNC:24156 | Ensembl Gene: ENSG00000135365 | OMIM ID: 608325 |
Expression of PHF21A:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | PHF21A | 51317 | 203278_s_at | -0.1401 | 0.8227 | |
| GSE20347 | PHF21A | 51317 | 203278_s_at | 0.0726 | 0.5332 | |
| GSE23400 | PHF21A | 51317 | 203278_s_at | 0.1298 | 0.0266 | |
| GSE26886 | PHF21A | 51317 | 203278_s_at | 0.6611 | 0.0059 | |
| GSE29001 | PHF21A | 51317 | 203278_s_at | 0.2168 | 0.3366 | |
| GSE38129 | PHF21A | 51317 | 203278_s_at | -0.0692 | 0.6251 | |
| GSE45670 | PHF21A | 51317 | 203278_s_at | 0.0565 | 0.6913 | |
| GSE63941 | PHF21A | 51317 | 203278_s_at | -0.8332 | 0.1413 | |
| GSE77861 | PHF21A | 51317 | 227090_at | 0.0040 | 0.9781 | |
| GSE97050 | PHF21A | 51317 | A_33_P3346473 | -0.3366 | 0.1927 | |
| SRP007169 | PHF21A | 51317 | RNAseq | 0.5885 | 0.2306 | |
| SRP008496 | PHF21A | 51317 | RNAseq | 0.7385 | 0.0228 | |
| SRP064894 | PHF21A | 51317 | RNAseq | 0.2515 | 0.1592 | |
| SRP133303 | PHF21A | 51317 | RNAseq | 0.4454 | 0.1532 | |
| SRP159526 | PHF21A | 51317 | RNAseq | -0.2295 | 0.3523 | |
| SRP193095 | PHF21A | 51317 | RNAseq | 0.2183 | 0.1149 | |
| SRP219564 | PHF21A | 51317 | RNAseq | -0.0256 | 0.9381 | |
| TCGA | PHF21A | 51317 | RNAseq | -0.0323 | 0.5137 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by PHF21A expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of PHF21A:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | PHF21A | 51317 | 3 | 7 | 20 | |
| GSE20123 | PHF21A | 51317 | 3 | 6 | 21 | |
| GSE43470 | PHF21A | 51317 | 2 | 5 | 36 | |
| GSE46452 | PHF21A | 51317 | 8 | 5 | 46 | |
| GSE47630 | PHF21A | 51317 | 3 | 9 | 28 | |
| GSE54993 | PHF21A | 51317 | 3 | 0 | 67 | |
| GSE54994 | PHF21A | 51317 | 1 | 10 | 42 | |
| GSE60625 | PHF21A | 51317 | 0 | 0 | 11 | |
| GSE74703 | PHF21A | 51317 | 2 | 2 | 32 | |
| GSE74704 | PHF21A | 51317 | 2 | 4 | 14 | |
| TCGA | PHF21A | 51317 | 15 | 19 | 62 |
Total number of gains: 42; Total number of losses: 67; Total Number of normals: 379.
Somatic mutations of PHF21A:
Generating mutation plots.
Highly correlated genes for PHF21A:
Showing top 20/122 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| PHF21A | PNMA6A | 0.781019 | 4 | 0 | 4 |
| PHF21A | TRIM17 | 0.757368 | 3 | 0 | 3 |
| PHF21A | PNPLA7 | 0.755184 | 3 | 0 | 3 |
| PHF21A | SPRN | 0.743713 | 3 | 0 | 3 |
| PHF21A | TIGD5 | 0.743077 | 3 | 0 | 3 |
| PHF21A | NOXA1 | 0.742575 | 3 | 0 | 3 |
| PHF21A | ADRA2C | 0.731869 | 4 | 0 | 3 |
| PHF21A | REM2 | 0.72639 | 3 | 0 | 3 |
| PHF21A | ISLR2 | 0.722393 | 3 | 0 | 3 |
| PHF21A | USP27X | 0.721925 | 3 | 0 | 3 |
| PHF21A | TOX2 | 0.717601 | 3 | 0 | 3 |
| PHF21A | ZKSCAN2 | 0.712834 | 3 | 0 | 3 |
| PHF21A | IL15RA | 0.709413 | 3 | 0 | 3 |
| PHF21A | NTNG2 | 0.708597 | 4 | 0 | 4 |
| PHF21A | OSBPL5 | 0.696049 | 4 | 0 | 4 |
| PHF21A | PDIA2 | 0.686736 | 3 | 0 | 3 |
| PHF21A | PRRT2 | 0.685642 | 4 | 0 | 4 |
| PHF21A | FOXL1 | 0.684188 | 3 | 0 | 3 |
| PHF21A | PHF21B | 0.680596 | 4 | 0 | 4 |
| PHF21A | ACE | 0.674326 | 3 | 0 | 3 |
For details and further investigation, click here
