| Full name: podocalyxin like | Alias Symbol: PCLP|Gp200|PC | ||
| Type: protein-coding gene | Cytoband: 7q32.3 | ||
| Entrez ID: 5420 | HGNC ID: HGNC:9171 | Ensembl Gene: ENSG00000128567 | OMIM ID: 602632 |
| Drug and gene relationship at DGIdb | |||
Expression of PODXL:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | PODXL | 5420 | 201578_at | 0.6549 | 0.2707 | |
| GSE20347 | PODXL | 5420 | 201578_at | 0.6714 | 0.0369 | |
| GSE23400 | PODXL | 5420 | 201578_at | 0.3967 | 0.0007 | |
| GSE26886 | PODXL | 5420 | 201578_at | 0.9475 | 0.0248 | |
| GSE29001 | PODXL | 5420 | 201578_at | 0.6450 | 0.1521 | |
| GSE38129 | PODXL | 5420 | 201578_at | 0.5005 | 0.0591 | |
| GSE45670 | PODXL | 5420 | 201578_at | -0.5147 | 0.1858 | |
| GSE53622 | PODXL | 5420 | 32686 | 0.1355 | 0.1864 | |
| GSE53624 | PODXL | 5420 | 32686 | 0.2558 | 0.0034 | |
| GSE63941 | PODXL | 5420 | 201578_at | 1.5022 | 0.0512 | |
| GSE77861 | PODXL | 5420 | 201578_at | 0.6043 | 0.0023 | |
| GSE97050 | PODXL | 5420 | A_23_P215060 | 0.2422 | 0.3399 | |
| SRP007169 | PODXL | 5420 | RNAseq | 2.2571 | 0.0000 | |
| SRP008496 | PODXL | 5420 | RNAseq | 2.3927 | 0.0000 | |
| SRP064894 | PODXL | 5420 | RNAseq | 0.6276 | 0.0302 | |
| SRP133303 | PODXL | 5420 | RNAseq | -0.1171 | 0.5218 | |
| SRP159526 | PODXL | 5420 | RNAseq | 0.7745 | 0.0874 | |
| SRP193095 | PODXL | 5420 | RNAseq | 0.7850 | 0.0000 | |
| SRP219564 | PODXL | 5420 | RNAseq | -0.0973 | 0.8075 | |
| TCGA | PODXL | 5420 | RNAseq | -0.1255 | 0.2024 |
Upregulated datasets: 2; Downregulated datasets: 0.
Survival by PODXL expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of PODXL:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | PODXL | 5420 | 7 | 1 | 22 | |
| GSE20123 | PODXL | 5420 | 6 | 1 | 23 | |
| GSE43470 | PODXL | 5420 | 2 | 3 | 38 | |
| GSE46452 | PODXL | 5420 | 7 | 2 | 50 | |
| GSE47630 | PODXL | 5420 | 7 | 4 | 29 | |
| GSE54993 | PODXL | 5420 | 3 | 5 | 62 | |
| GSE54994 | PODXL | 5420 | 7 | 7 | 39 | |
| GSE60625 | PODXL | 5420 | 0 | 0 | 11 | |
| GSE74703 | PODXL | 5420 | 2 | 3 | 31 | |
| GSE74704 | PODXL | 5420 | 3 | 1 | 16 | |
| TCGA | PODXL | 5420 | 27 | 23 | 46 |
Total number of gains: 71; Total number of losses: 50; Total Number of normals: 367.
Somatic mutations of PODXL:
Generating mutation plots.
Highly correlated genes for PODXL:
Showing top 20/325 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| PODXL | EFTUD2 | 0.655258 | 4 | 0 | 3 |
| PODXL | PRAME | 0.647195 | 5 | 0 | 4 |
| PODXL | WRAP53 | 0.642041 | 4 | 0 | 4 |
| PODXL | FAIM | 0.63747 | 3 | 0 | 3 |
| PODXL | MAST3 | 0.629369 | 3 | 0 | 3 |
| PODXL | ODF2 | 0.628825 | 4 | 0 | 3 |
| PODXL | TIMM50 | 0.626375 | 4 | 0 | 3 |
| PODXL | MLLT11 | 0.620063 | 3 | 0 | 3 |
| PODXL | RAB3IP | 0.612506 | 4 | 0 | 3 |
| PODXL | HMBS | 0.611138 | 3 | 0 | 3 |
| PODXL | PAFAH1B3 | 0.610562 | 6 | 0 | 4 |
| PODXL | PRR5 | 0.608046 | 4 | 0 | 3 |
| PODXL | EPB41L4B | 0.604286 | 4 | 0 | 4 |
| PODXL | MAGEA11 | 0.603874 | 4 | 0 | 3 |
| PODXL | BANP | 0.603366 | 4 | 0 | 3 |
| PODXL | CDC45 | 0.60205 | 6 | 0 | 4 |
| PODXL | LASP1 | 0.601788 | 4 | 0 | 3 |
| PODXL | POLR2H | 0.600355 | 6 | 0 | 3 |
| PODXL | TIMELESS | 0.60025 | 7 | 0 | 6 |
| PODXL | CECR2 | 0.598561 | 4 | 0 | 3 |
For details and further investigation, click here
