WRAP53

 

Full name: WD repeat containing antisense to TP53 Alias Symbol: FLJ10385|TCAB1
Type: protein-coding gene Cytoband: 17p13.1
Entrez ID: 55135 HGNC ID: HGNC:25522 Ensembl Gene: ENSG00000141499 OMIM ID: 612661
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of WRAP53:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 WRAP53 55135 44563_at 0.6302 0.0132
GSE20347 WRAP53 55135 44563_at 0.4583 0.0001
GSE23400 WRAP53 55135 44563_at 0.1408 0.0021
GSE26886 WRAP53 55135 44563_at 0.6062 0.0001
GSE29001 WRAP53 55135 44563_at 0.1237 0.4847
GSE38129 WRAP53 55135 44563_at 0.4522 0.0000
GSE45670 WRAP53 55135 44563_at 0.4856 0.0001
GSE53622 WRAP53 55135 27301 -0.5914 0.0000
GSE53624 WRAP53 55135 27301 -1.7927 0.0000
GSE63941 WRAP53 55135 44563_at 0.8643 0.0024
GSE77861 WRAP53 55135 44563_at 0.1774 0.1116
GSE97050 WRAP53 55135 A_23_P55064 0.1577 0.5286
SRP007169 WRAP53 55135 RNAseq 1.3682 0.0092
SRP008496 WRAP53 55135 RNAseq 1.3371 0.0014
SRP064894 WRAP53 55135 RNAseq 1.3785 0.0000
SRP133303 WRAP53 55135 RNAseq 0.6638 0.0017
SRP159526 WRAP53 55135 RNAseq 1.2409 0.0001
SRP193095 WRAP53 55135 RNAseq 0.7858 0.0000
SRP219564 WRAP53 55135 RNAseq 1.4462 0.0009
TCGA WRAP53 55135 RNAseq 0.3636 0.0000

Upregulated datasets: 5; Downregulated datasets: 1.  


 

Survival by WRAP53 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of WRAP53:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 WRAP53 55135 4 2 24
GSE20123 WRAP53 55135 4 3 23
GSE43470 WRAP53 55135 1 6 36
GSE46452 WRAP53 55135 34 1 24
GSE47630 WRAP53 55135 7 1 32
GSE54993 WRAP53 55135 4 3 63
GSE54994 WRAP53 55135 5 8 40
GSE60625 WRAP53 55135 4 0 7
GSE74703 WRAP53 55135 1 3 32
GSE74704 WRAP53 55135 2 1 17
TCGA WRAP53 55135 17 21 58

Total number of gains: 83; Total number of losses: 49; Total Number of normals: 356.  


 

Somatic mutations of WRAP53:

 

Generating mutation plots.

 

Highly correlated genes for WRAP53:

 

Showing top 20/331 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
WRAP53RIMS40.7528303
WRAP53SLX40.736044303
WRAP53TNFAIP8L10.734695606
WRAP53AGAP2-AS10.713766404
WRAP53STMN30.706556303
WRAP53FANCD20.704504303
WRAP53PKMYT10.701124908
WRAP53CCDC1140.693188303
WRAP53NPW0.691999404
WRAP53CDC60.675864807
WRAP53MEI10.6715303
WRAP53LRRC450.665996404
WRAP53FAM163B0.665275303
WRAP53MTFP10.660638505
WRAP53SPRR2G0.652413303
WRAP53HOXA100.652033808
WRAP53SUPT6H0.651249404
WRAP53ABCC100.647736403
WRAP53MEX3D0.647443403
WRAP53KLHL260.645144403

For details and further investigation, click here