RAB27A

 

Full name: RAB27A, member RAS oncogene family Alias Symbol: RAB27|RAM|GS2|HsT18676
Type: protein-coding gene Cytoband: 15q21.3
Entrez ID: 5873 HGNC ID: HGNC:9766 Ensembl Gene: ENSG00000069974 OMIM ID: 603868
Drug and gene relationship at DGIdb

 

Expression of RAB27A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 RAB27A 5873 210951_x_at -0.3683 0.5230
GSE20347 RAB27A 5873 209515_s_at -0.6438 0.0041
GSE23400 RAB27A 5873 210951_x_at -0.4557 0.0000
GSE26886 RAB27A 5873 210951_x_at -1.0187 0.0007
GSE29001 RAB27A 5873 210951_x_at -0.6708 0.0118
GSE38129 RAB27A 5873 209515_s_at -0.7812 0.0000
GSE45670 RAB27A 5873 210951_x_at 0.1564 0.4957
GSE53622 RAB27A 5873 67349 -0.4749 0.0000
GSE53624 RAB27A 5873 67349 -0.9805 0.0000
GSE63941 RAB27A 5873 210951_x_at 0.3453 0.5875
GSE77861 RAB27A 5873 209514_s_at -0.7502 0.0035
GSE97050 RAB27A 5873 A_24_P373174 -0.2308 0.3781
SRP007169 RAB27A 5873 RNAseq -1.9874 0.0000
SRP008496 RAB27A 5873 RNAseq -1.5872 0.0000
SRP064894 RAB27A 5873 RNAseq -0.4105 0.0268
SRP133303 RAB27A 5873 RNAseq -0.0889 0.6138
SRP159526 RAB27A 5873 RNAseq -0.8736 0.0166
SRP193095 RAB27A 5873 RNAseq -0.6437 0.0113
SRP219564 RAB27A 5873 RNAseq -0.2538 0.4062
TCGA RAB27A 5873 RNAseq -0.5943 0.0000

Upregulated datasets: 0; Downregulated datasets: 3.  


 

Survival by RAB27A expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of RAB27A:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 RAB27A 5873 6 3 21
GSE20123 RAB27A 5873 6 3 21
GSE43470 RAB27A 5873 4 3 36
GSE46452 RAB27A 5873 3 7 49
GSE47630 RAB27A 5873 8 10 22
GSE54993 RAB27A 5873 5 6 59
GSE54994 RAB27A 5873 5 8 40
GSE60625 RAB27A 5873 4 0 7
GSE74703 RAB27A 5873 4 2 30
GSE74704 RAB27A 5873 2 3 15
TCGA RAB27A 5873 10 16 70

Total number of gains: 57; Total number of losses: 61; Total Number of normals: 370.  


 

Somatic mutations of RAB27A:

 

Generating mutation plots.

 

Highly correlated genes for RAB27A:

 

Showing top 20/1015 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
RAB27ARBM200.787769303
RAB27AUSP540.784926303
RAB27AHDHD20.780235303
RAB27AOPHN10.767228404
RAB27AZNF8440.762493303
RAB27AITGAD0.759753303
RAB27ANACA20.758973303
RAB27APITHD10.749356404
RAB27ATMEM2340.739688303
RAB27AGIMAP50.730117303
RAB27ARCSD10.729576303
RAB27ATMEM610.727763303
RAB27AIGIP0.719051303
RAB27AARFGEF20.715838303
RAB27AATP13A40.714823303
RAB27ARNGTT0.710822404
RAB27ASLC46A20.710058504
RAB27AARG20.708807404
RAB27AZFAND2B0.708037303
RAB27AKLHDC10.704948303

For details and further investigation, click here