| Full name: RAB interacting factor | Alias Symbol: mss4 | ||
| Type: protein-coding gene | Cytoband: 1q32.1 | ||
| Entrez ID: 5877 | HGNC ID: HGNC:9797 | Ensembl Gene: ENSG00000183155 | OMIM ID: 603417 |
| Drug and gene relationship at DGIdb | |||
Screen Evidence:
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Expression of RABIF:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RABIF | 5877 | 204478_s_at | 0.1322 | 0.8197 | |
| GSE20347 | RABIF | 5877 | 204478_s_at | -0.3695 | 0.0072 | |
| GSE23400 | RABIF | 5877 | 204478_s_at | -0.0518 | 0.4143 | |
| GSE26886 | RABIF | 5877 | 204478_s_at | -0.3291 | 0.1783 | |
| GSE29001 | RABIF | 5877 | 204478_s_at | -0.3476 | 0.0989 | |
| GSE38129 | RABIF | 5877 | 204478_s_at | 0.0786 | 0.7091 | |
| GSE45670 | RABIF | 5877 | 204478_s_at | 0.2043 | 0.1190 | |
| GSE53622 | RABIF | 5877 | 58845 | -0.2131 | 0.0189 | |
| GSE53624 | RABIF | 5877 | 58845 | -0.4431 | 0.0005 | |
| GSE63941 | RABIF | 5877 | 204478_s_at | 0.1293 | 0.8024 | |
| GSE77861 | RABIF | 5877 | 204478_s_at | -0.0764 | 0.6456 | |
| GSE97050 | RABIF | 5877 | A_24_P336718 | 0.1161 | 0.7456 | |
| SRP007169 | RABIF | 5877 | RNAseq | -1.4113 | 0.0000 | |
| SRP008496 | RABIF | 5877 | RNAseq | -1.2181 | 0.0000 | |
| SRP064894 | RABIF | 5877 | RNAseq | -0.1152 | 0.5492 | |
| SRP133303 | RABIF | 5877 | RNAseq | -0.1218 | 0.4205 | |
| SRP159526 | RABIF | 5877 | RNAseq | -0.1688 | 0.5923 | |
| SRP193095 | RABIF | 5877 | RNAseq | -0.3509 | 0.0007 | |
| SRP219564 | RABIF | 5877 | RNAseq | -0.1815 | 0.6780 | |
| TCGA | RABIF | 5877 | RNAseq | 0.2035 | 0.0010 |
Upregulated datasets: 0; Downregulated datasets: 2.
Survival by RABIF expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RABIF:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RABIF | 5877 | 11 | 0 | 19 | |
| GSE20123 | RABIF | 5877 | 11 | 0 | 19 | |
| GSE43470 | RABIF | 5877 | 6 | 0 | 37 | |
| GSE46452 | RABIF | 5877 | 3 | 1 | 55 | |
| GSE47630 | RABIF | 5877 | 14 | 0 | 26 | |
| GSE54993 | RABIF | 5877 | 0 | 6 | 64 | |
| GSE54994 | RABIF | 5877 | 15 | 0 | 38 | |
| GSE60625 | RABIF | 5877 | 0 | 0 | 11 | |
| GSE74703 | RABIF | 5877 | 6 | 0 | 30 | |
| GSE74704 | RABIF | 5877 | 5 | 0 | 15 | |
| TCGA | RABIF | 5877 | 43 | 4 | 49 |
Total number of gains: 114; Total number of losses: 11; Total Number of normals: 363.
Somatic mutations of RABIF:
Generating mutation plots.
Highly correlated genes for RABIF:
Showing top 20/520 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RABIF | SUGP1 | 0.819227 | 3 | 0 | 3 |
| RABIF | NUDT19 | 0.779526 | 3 | 0 | 3 |
| RABIF | CDC42SE1 | 0.746428 | 4 | 0 | 4 |
| RABIF | ZNF700 | 0.742806 | 3 | 0 | 3 |
| RABIF | E2F8 | 0.717415 | 4 | 0 | 4 |
| RABIF | LACTB | 0.715681 | 3 | 0 | 3 |
| RABIF | SLC35A3 | 0.713849 | 4 | 0 | 3 |
| RABIF | DCTN3 | 0.711944 | 3 | 0 | 3 |
| RABIF | PHRF1 | 0.70757 | 3 | 0 | 3 |
| RABIF | ALKBH3 | 0.706656 | 3 | 0 | 3 |
| RABIF | LCMT1 | 0.705482 | 4 | 0 | 3 |
| RABIF | HSDL2 | 0.69164 | 3 | 0 | 3 |
| RABIF | RAB11B | 0.69115 | 3 | 0 | 3 |
| RABIF | NXT2 | 0.690921 | 4 | 0 | 4 |
| RABIF | ASH1L | 0.686031 | 3 | 0 | 3 |
| RABIF | IPMK | 0.685337 | 3 | 0 | 3 |
| RABIF | LAD1 | 0.677798 | 9 | 0 | 8 |
| RABIF | TXNDC9 | 0.67657 | 3 | 0 | 3 |
| RABIF | CELSR2 | 0.673489 | 4 | 0 | 3 |
| RABIF | EID2 | 0.672982 | 3 | 0 | 3 |
For details and further investigation, click here
