| Full name: CDC42 small effector 1 | Alias Symbol: SCIP1|SPEC1 | ||
| Type: protein-coding gene | Cytoband: 1q21.3 | ||
| Entrez ID: 56882 | HGNC ID: HGNC:17719 | Ensembl Gene: ENSG00000197622 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of CDC42SE1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CDC42SE1 | 56882 | 218157_x_at | 0.3613 | 0.4013 | |
| GSE20347 | CDC42SE1 | 56882 | 218157_x_at | -0.3061 | 0.0074 | |
| GSE23400 | CDC42SE1 | 56882 | 218157_x_at | 0.0286 | 0.7045 | |
| GSE26886 | CDC42SE1 | 56882 | 229120_s_at | 0.1236 | 0.6569 | |
| GSE29001 | CDC42SE1 | 56882 | 218157_x_at | -0.1320 | 0.6921 | |
| GSE38129 | CDC42SE1 | 56882 | 218157_x_at | 0.0607 | 0.7070 | |
| GSE45670 | CDC42SE1 | 56882 | 218157_x_at | 0.0404 | 0.8210 | |
| GSE63941 | CDC42SE1 | 56882 | 218157_x_at | 0.3600 | 0.0934 | |
| GSE77861 | CDC42SE1 | 56882 | 218157_x_at | 0.0522 | 0.8665 | |
| GSE97050 | CDC42SE1 | 56882 | A_23_P320887 | 0.4380 | 0.2385 | |
| SRP007169 | CDC42SE1 | 56882 | RNAseq | 0.0382 | 0.8993 | |
| SRP008496 | CDC42SE1 | 56882 | RNAseq | 0.3693 | 0.1153 | |
| SRP064894 | CDC42SE1 | 56882 | RNAseq | -0.6809 | 0.0001 | |
| SRP133303 | CDC42SE1 | 56882 | RNAseq | -0.0467 | 0.7357 | |
| SRP159526 | CDC42SE1 | 56882 | RNAseq | -0.0087 | 0.9713 | |
| SRP193095 | CDC42SE1 | 56882 | RNAseq | -0.2020 | 0.1353 | |
| SRP219564 | CDC42SE1 | 56882 | RNAseq | -0.4504 | 0.3023 | |
| TCGA | CDC42SE1 | 56882 | RNAseq | 0.1370 | 0.0018 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by CDC42SE1 expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of CDC42SE1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CDC42SE1 | 56882 | 14 | 0 | 16 | |
| GSE20123 | CDC42SE1 | 56882 | 14 | 0 | 16 | |
| GSE43470 | CDC42SE1 | 56882 | 6 | 1 | 36 | |
| GSE46452 | CDC42SE1 | 56882 | 2 | 1 | 56 | |
| GSE47630 | CDC42SE1 | 56882 | 14 | 0 | 26 | |
| GSE54993 | CDC42SE1 | 56882 | 0 | 4 | 66 | |
| GSE54994 | CDC42SE1 | 56882 | 15 | 0 | 38 | |
| GSE60625 | CDC42SE1 | 56882 | 0 | 0 | 11 | |
| GSE74703 | CDC42SE1 | 56882 | 6 | 1 | 29 | |
| GSE74704 | CDC42SE1 | 56882 | 7 | 0 | 13 | |
| TCGA | CDC42SE1 | 56882 | 37 | 2 | 57 |
Total number of gains: 115; Total number of losses: 9; Total Number of normals: 364.
Somatic mutations of CDC42SE1:
Generating mutation plots.
Highly correlated genes for CDC42SE1:
Showing top 20/195 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CDC42SE1 | ABCE1 | 0.75598 | 3 | 0 | 3 |
| CDC42SE1 | RABIF | 0.746428 | 4 | 0 | 4 |
| CDC42SE1 | TSPAN5 | 0.742491 | 3 | 0 | 3 |
| CDC42SE1 | MAP4K4 | 0.738759 | 3 | 0 | 3 |
| CDC42SE1 | OLA1 | 0.731338 | 3 | 0 | 3 |
| CDC42SE1 | ZCCHC2 | 0.724168 | 3 | 0 | 3 |
| CDC42SE1 | MRRF | 0.723743 | 3 | 0 | 3 |
| CDC42SE1 | MAGT1 | 0.721546 | 3 | 0 | 3 |
| CDC42SE1 | WDR37 | 0.714717 | 3 | 0 | 3 |
| CDC42SE1 | ZNF75A | 0.712827 | 3 | 0 | 3 |
| CDC42SE1 | NUS1 | 0.703086 | 3 | 0 | 3 |
| CDC42SE1 | TTC39C | 0.70256 | 3 | 0 | 3 |
| CDC42SE1 | CDC25A | 0.701867 | 3 | 0 | 3 |
| CDC42SE1 | SERPINB8 | 0.693081 | 3 | 0 | 3 |
| CDC42SE1 | TAOK3 | 0.692906 | 3 | 0 | 3 |
| CDC42SE1 | CBLC | 0.691863 | 4 | 0 | 3 |
| CDC42SE1 | MFSD5 | 0.689563 | 3 | 0 | 3 |
| CDC42SE1 | AGA | 0.689517 | 3 | 0 | 3 |
| CDC42SE1 | CASP4 | 0.685617 | 4 | 0 | 3 |
| CDC42SE1 | RAB5A | 0.685525 | 3 | 0 | 3 |
For details and further investigation, click here
