| Full name: retinol binding protein 3 | Alias Symbol: D10S64|D10S65|D10S66|RP66 | ||
| Type: protein-coding gene | Cytoband: 10q11.22 | ||
| Entrez ID: 5949 | HGNC ID: HGNC:9921 | Ensembl Gene: ENSG00000265203 | OMIM ID: 180290 |
| Drug and gene relationship at DGIdb | |||
Expression of RBP3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RBP3 | 5949 | 210318_at | -0.1846 | 0.3514 | |
| GSE20347 | RBP3 | 5949 | 210318_at | -0.0707 | 0.2087 | |
| GSE23400 | RBP3 | 5949 | 210318_at | -0.0915 | 0.0003 | |
| GSE26886 | RBP3 | 5949 | 210318_at | 0.2092 | 0.0288 | |
| GSE29001 | RBP3 | 5949 | 210318_at | -0.1272 | 0.2150 | |
| GSE38129 | RBP3 | 5949 | 210318_at | -0.1370 | 0.0182 | |
| GSE45670 | RBP3 | 5949 | 210318_at | 0.0178 | 0.8823 | |
| GSE53622 | RBP3 | 5949 | 21640 | -0.3048 | 0.0044 | |
| GSE53624 | RBP3 | 5949 | 21640 | 0.1067 | 0.3013 | |
| GSE63941 | RBP3 | 5949 | 210318_at | 0.1843 | 0.1593 | |
| GSE77861 | RBP3 | 5949 | 210318_at | -0.1682 | 0.2199 | |
| TCGA | RBP3 | 5949 | RNAseq | 0.7928 | 0.3434 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by RBP3 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RBP3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RBP3 | 5949 | 2 | 5 | 23 | |
| GSE20123 | RBP3 | 5949 | 2 | 5 | 23 | |
| GSE43470 | RBP3 | 5949 | 1 | 6 | 36 | |
| GSE46452 | RBP3 | 5949 | 0 | 13 | 46 | |
| GSE47630 | RBP3 | 5949 | 4 | 13 | 23 | |
| GSE54993 | RBP3 | 5949 | 9 | 0 | 61 | |
| GSE54994 | RBP3 | 5949 | 2 | 10 | 41 | |
| GSE60625 | RBP3 | 5949 | 0 | 0 | 11 | |
| GSE74703 | RBP3 | 5949 | 1 | 3 | 32 | |
| GSE74704 | RBP3 | 5949 | 1 | 4 | 15 | |
| TCGA | RBP3 | 5949 | 16 | 18 | 62 |
Total number of gains: 38; Total number of losses: 77; Total Number of normals: 373.
Somatic mutations of RBP3:
Generating mutation plots.
Highly correlated genes for RBP3:
Showing top 20/668 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RBP3 | CDH23 | 0.688992 | 3 | 0 | 3 |
| RBP3 | ADAMTS10 | 0.687948 | 3 | 0 | 3 |
| RBP3 | ATP4A | 0.683982 | 4 | 0 | 3 |
| RBP3 | HOXD9 | 0.682068 | 3 | 0 | 3 |
| RBP3 | MATN1 | 0.679579 | 3 | 0 | 3 |
| RBP3 | KRT31 | 0.671611 | 3 | 0 | 3 |
| RBP3 | ZNF358 | 0.670664 | 3 | 0 | 3 |
| RBP3 | MAP3K10 | 0.665454 | 6 | 0 | 6 |
| RBP3 | NRG1 | 0.658477 | 3 | 0 | 3 |
| RBP3 | IBA57 | 0.652443 | 5 | 0 | 5 |
| RBP3 | KIF19 | 0.652054 | 4 | 0 | 4 |
| RBP3 | RSPH6A | 0.650781 | 5 | 0 | 5 |
| RBP3 | MIA | 0.649758 | 3 | 0 | 3 |
| RBP3 | C2CD4B | 0.646464 | 3 | 0 | 3 |
| RBP3 | NFKBIL1 | 0.644325 | 4 | 0 | 4 |
| RBP3 | MAG | 0.642744 | 6 | 0 | 5 |
| RBP3 | EPS8L3 | 0.642424 | 5 | 0 | 5 |
| RBP3 | EPM2A | 0.641287 | 3 | 0 | 3 |
| RBP3 | PPFIA2 | 0.640687 | 4 | 0 | 4 |
| RBP3 | TNXB | 0.638 | 6 | 0 | 5 |
For details and further investigation, click here
