RECQL5

 

Full name: RecQ like helicase 5 Alias Symbol: RecQ5|FLJ90603
Type: protein-coding gene Cytoband: 17q25
Entrez ID: 9400 HGNC ID: HGNC:9950 Ensembl Gene: ENSG00000108469 OMIM ID: 603781
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of RECQL5:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 RECQL5 9400 221686_s_at -0.4346 0.1236
GSE20347 RECQL5 9400 221686_s_at -0.5025 0.0000
GSE23400 RECQL5 9400 221686_s_at -0.4984 0.0000
GSE26886 RECQL5 9400 221686_s_at -1.0040 0.0000
GSE29001 RECQL5 9400 221686_s_at -0.6345 0.0068
GSE38129 RECQL5 9400 221686_s_at -0.4505 0.0000
GSE45670 RECQL5 9400 221686_s_at -0.2034 0.1600
GSE53622 RECQL5 9400 29622 -0.8507 0.0000
GSE53624 RECQL5 9400 29622 -0.9561 0.0000
GSE63941 RECQL5 9400 221686_s_at 0.8848 0.0007
GSE77861 RECQL5 9400 221686_s_at -0.2420 0.3741
GSE97050 RECQL5 9400 A_33_P3268974 0.0067 0.9790
SRP007169 RECQL5 9400 RNAseq -1.3335 0.0011
SRP008496 RECQL5 9400 RNAseq -1.7263 0.0000
SRP064894 RECQL5 9400 RNAseq -0.6241 0.0025
SRP133303 RECQL5 9400 RNAseq -0.4483 0.0438
SRP159526 RECQL5 9400 RNAseq -0.3665 0.4129
SRP193095 RECQL5 9400 RNAseq -0.6674 0.0000
SRP219564 RECQL5 9400 RNAseq -0.1473 0.8129
TCGA RECQL5 9400 RNAseq -0.0755 0.1653

Upregulated datasets: 0; Downregulated datasets: 3.  


 

Survival by RECQL5 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of RECQL5:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 RECQL5 9400 7 2 21
GSE20123 RECQL5 9400 7 2 21
GSE43470 RECQL5 9400 5 3 35
GSE46452 RECQL5 9400 34 0 25
GSE47630 RECQL5 9400 8 1 31
GSE54993 RECQL5 9400 2 5 63
GSE54994 RECQL5 9400 10 4 39
GSE60625 RECQL5 9400 6 0 5
GSE74703 RECQL5 9400 5 1 30
GSE74704 RECQL5 9400 5 1 14
TCGA RECQL5 9400 32 9 55

Total number of gains: 121; Total number of losses: 28; Total Number of normals: 339.  


 

Somatic mutations of RECQL5:

 

Generating mutation plots.

 

Highly correlated genes for RECQL5:

 

Showing top 20/1411 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
RECQL5PADI10.791402909
RECQL5SCNN1B0.79129610010
RECQL5MRPL380.788562303
RECQL5LLGL20.78032411011
RECQL5COPE0.770056303
RECQL5RMND5B0.7604612012
RECQL5MAB21L30.760241505
RECQL5EVPL0.75805412011
RECQL5SMIM50.757752707
RECQL5PLEKHG60.75522811011
RECQL5TOM10.75481911011
RECQL5IDH3G0.754557303
RECQL5SNORA680.753297404
RECQL5ARHGAP270.751682808
RECQL5EPS8L10.75028111011
RECQL5GTF3C10.74967111011
RECQL5AP3M10.749492303
RECQL5TRIP100.74612612012
RECQL5TPCN10.74588911010
RECQL5SLC10A50.742658303

For details and further investigation, click here