| Full name: ribosomal protein S28 | Alias Symbol: S28|eS28 | ||
| Type: protein-coding gene | Cytoband: 19p13.2 | ||
| Entrez ID: 6234 | HGNC ID: HGNC:10418 | Ensembl Gene: ENSG00000233927 | OMIM ID: 603685 |
| Drug and gene relationship at DGIdb | |||
Expression of RPS28:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RPS28 | 6234 | 208904_s_at | -0.0445 | 0.8646 | |
| GSE20347 | RPS28 | 6234 | 208904_s_at | -0.0803 | 0.2830 | |
| GSE23400 | RPS28 | 6234 | 208904_s_at | -0.1006 | 0.0957 | |
| GSE26886 | RPS28 | 6234 | 208904_s_at | 0.1921 | 0.0233 | |
| GSE29001 | RPS28 | 6234 | 208904_s_at | -0.1355 | 0.5532 | |
| GSE38129 | RPS28 | 6234 | 208904_s_at | -0.0145 | 0.8332 | |
| GSE45670 | RPS28 | 6234 | 208904_s_at | -0.1209 | 0.0265 | |
| GSE53622 | RPS28 | 6234 | 43989 | -0.5433 | 0.0000 | |
| GSE53624 | RPS28 | 6234 | 43989 | -0.1156 | 0.0321 | |
| GSE63941 | RPS28 | 6234 | 208904_s_at | -0.1646 | 0.4249 | |
| GSE77861 | RPS28 | 6234 | 208904_s_at | -0.0934 | 0.4885 | |
| GSE97050 | RPS28 | 6234 | A_33_P3282836 | -0.5273 | 0.2433 | |
| SRP007169 | RPS28 | 6234 | RNAseq | -1.4636 | 0.0001 | |
| SRP008496 | RPS28 | 6234 | RNAseq | -1.3689 | 0.0000 | |
| SRP064894 | RPS28 | 6234 | RNAseq | 0.1056 | 0.8151 | |
| SRP133303 | RPS28 | 6234 | RNAseq | -0.9872 | 0.0000 | |
| SRP159526 | RPS28 | 6234 | RNAseq | -0.7970 | 0.0000 | |
| SRP193095 | RPS28 | 6234 | RNAseq | -0.9870 | 0.0000 | |
| SRP219564 | RPS28 | 6234 | RNAseq | 0.0948 | 0.8327 | |
| TCGA | RPS28 | 6234 | RNAseq | -0.1924 | 0.5447 |
Upregulated datasets: 0; Downregulated datasets: 2.
Survival by RPS28 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RPS28:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RPS28 | 6234 | 4 | 3 | 23 | |
| GSE20123 | RPS28 | 6234 | 3 | 2 | 25 | |
| GSE43470 | RPS28 | 6234 | 2 | 6 | 35 | |
| GSE46452 | RPS28 | 6234 | 47 | 1 | 11 | |
| GSE47630 | RPS28 | 6234 | 5 | 7 | 28 | |
| GSE54993 | RPS28 | 6234 | 16 | 3 | 51 | |
| GSE54994 | RPS28 | 6234 | 6 | 14 | 33 | |
| GSE60625 | RPS28 | 6234 | 9 | 0 | 2 | |
| GSE74703 | RPS28 | 6234 | 2 | 4 | 30 | |
| GSE74704 | RPS28 | 6234 | 0 | 2 | 18 | |
| TCGA | RPS28 | 6234 | 10 | 19 | 67 |
Total number of gains: 104; Total number of losses: 61; Total Number of normals: 323.
Somatic mutations of RPS28:
Generating mutation plots.
Highly correlated genes for RPS28:
Showing top 20/270 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RPS28 | EEF1A1 | 0.698473 | 3 | 0 | 3 |
| RPS28 | RPL41 | 0.691329 | 5 | 0 | 5 |
| RPS28 | CLPS | 0.667711 | 3 | 0 | 3 |
| RPS28 | RPL27 | 0.657319 | 6 | 0 | 5 |
| RPS28 | RPL34 | 0.64972 | 7 | 0 | 5 |
| RPS28 | BLOC1S2 | 0.64914 | 3 | 0 | 3 |
| RPS28 | RPLP1 | 0.647841 | 6 | 0 | 5 |
| RPS28 | RPL9 | 0.646711 | 5 | 0 | 5 |
| RPS28 | EPN1 | 0.641508 | 4 | 0 | 3 |
| RPS28 | PPP1R37 | 0.640041 | 3 | 0 | 3 |
| RPS28 | TEAD3 | 0.638046 | 4 | 0 | 4 |
| RPS28 | CYP27A1 | 0.636157 | 4 | 0 | 3 |
| RPS28 | TEX9 | 0.634551 | 3 | 0 | 3 |
| RPS28 | C4orf3 | 0.634126 | 3 | 0 | 3 |
| RPS28 | RPS6 | 0.63346 | 7 | 0 | 5 |
| RPS28 | RPL18 | 0.632432 | 9 | 0 | 6 |
| RPS28 | RPL36 | 0.631151 | 11 | 0 | 9 |
| RPS28 | COMTD1 | 0.630977 | 3 | 0 | 3 |
| RPS28 | PSENEN | 0.630381 | 3 | 0 | 3 |
| RPS28 | VPS53 | 0.627437 | 3 | 0 | 3 |
For details and further investigation, click here
