| Full name: RUN domain containing 3B | Alias Symbol: RPIP9|RPIB9 | ||
| Type: protein-coding gene | Cytoband: 7q21.12 | ||
| Entrez ID: 154661 | HGNC ID: HGNC:30286 | Ensembl Gene: ENSG00000105784 | OMIM ID: 617295 |
| Drug and gene relationship at DGIdb | |||
Expression of RUNDC3B:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RUNDC3B | 154661 | 241703_at | -1.4240 | 0.0336 | |
| GSE20347 | RUNDC3B | 154661 | 215321_at | -0.9601 | 0.0000 | |
| GSE23400 | RUNDC3B | 154661 | 215321_at | -0.1197 | 0.0000 | |
| GSE26886 | RUNDC3B | 154661 | 241703_at | -1.1852 | 0.0110 | |
| GSE29001 | RUNDC3B | 154661 | 215321_at | -1.1622 | 0.0027 | |
| GSE38129 | RUNDC3B | 154661 | 215321_at | -0.9911 | 0.0000 | |
| GSE45670 | RUNDC3B | 154661 | 241703_at | -1.7082 | 0.0001 | |
| GSE53622 | RUNDC3B | 154661 | 38494 | -1.9314 | 0.0000 | |
| GSE53624 | RUNDC3B | 154661 | 38494 | -1.8500 | 0.0000 | |
| GSE63941 | RUNDC3B | 154661 | 241703_at | -2.3821 | 0.0015 | |
| GSE77861 | RUNDC3B | 154661 | 215321_at | -0.2314 | 0.4603 | |
| SRP064894 | RUNDC3B | 154661 | RNAseq | -0.6940 | 0.0475 | |
| SRP133303 | RUNDC3B | 154661 | RNAseq | -1.4815 | 0.0000 | |
| SRP159526 | RUNDC3B | 154661 | RNAseq | -1.4687 | 0.0003 | |
| SRP193095 | RUNDC3B | 154661 | RNAseq | -0.6521 | 0.0004 | |
| SRP219564 | RUNDC3B | 154661 | RNAseq | -1.5001 | 0.0021 | |
| TCGA | RUNDC3B | 154661 | RNAseq | -0.5977 | 0.0173 |
Upregulated datasets: 0; Downregulated datasets: 10.
Survival by RUNDC3B expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RUNDC3B:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RUNDC3B | 154661 | 13 | 1 | 16 | |
| GSE20123 | RUNDC3B | 154661 | 13 | 1 | 16 | |
| GSE43470 | RUNDC3B | 154661 | 5 | 1 | 37 | |
| GSE46452 | RUNDC3B | 154661 | 12 | 0 | 47 | |
| GSE47630 | RUNDC3B | 154661 | 8 | 2 | 30 | |
| GSE54993 | RUNDC3B | 154661 | 2 | 7 | 61 | |
| GSE54994 | RUNDC3B | 154661 | 17 | 2 | 34 | |
| GSE60625 | RUNDC3B | 154661 | 0 | 0 | 11 | |
| GSE74703 | RUNDC3B | 154661 | 4 | 1 | 31 | |
| GSE74704 | RUNDC3B | 154661 | 9 | 1 | 10 | |
| TCGA | RUNDC3B | 154661 | 54 | 4 | 38 |
Total number of gains: 137; Total number of losses: 20; Total Number of normals: 331.
Somatic mutations of RUNDC3B:
Generating mutation plots.
Highly correlated genes for RUNDC3B:
Showing top 20/1008 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RUNDC3B | LINC01279 | 0.761317 | 3 | 0 | 3 |
| RUNDC3B | LIFR | 0.747407 | 4 | 0 | 4 |
| RUNDC3B | LRRK2 | 0.722007 | 5 | 0 | 5 |
| RUNDC3B | FIBIN | 0.720282 | 3 | 0 | 3 |
| RUNDC3B | ECSCR | 0.709888 | 4 | 0 | 4 |
| RUNDC3B | GREM2 | 0.709439 | 7 | 0 | 7 |
| RUNDC3B | NEGR1 | 0.708094 | 5 | 0 | 5 |
| RUNDC3B | HEIH | 0.707318 | 3 | 0 | 3 |
| RUNDC3B | C1QTNF7 | 0.707209 | 4 | 0 | 4 |
| RUNDC3B | ZNF521 | 0.705774 | 3 | 0 | 3 |
| RUNDC3B | MYOCD | 0.700066 | 4 | 0 | 4 |
| RUNDC3B | COA3 | 0.693636 | 4 | 0 | 4 |
| RUNDC3B | SYNPO2 | 0.691587 | 5 | 0 | 5 |
| RUNDC3B | TCEAL7 | 0.689175 | 3 | 0 | 3 |
| RUNDC3B | ARHGAP31 | 0.687638 | 5 | 0 | 4 |
| RUNDC3B | MFAP4 | 0.685521 | 6 | 0 | 6 |
| RUNDC3B | CAPZA2 | 0.683578 | 4 | 0 | 3 |
| RUNDC3B | CNTN4 | 0.683122 | 4 | 0 | 4 |
| RUNDC3B | MSRB3 | 0.68149 | 5 | 0 | 5 |
| RUNDC3B | PRICKLE2 | 0.679744 | 6 | 0 | 6 |
For details and further investigation, click here
