SCGB3A2

 

Full name: secretoglobin family 3A member 2 Alias Symbol: UGRP1|LU103|PNSP1
Type: protein-coding gene Cytoband: 5q32
Entrez ID: 117156 HGNC ID: HGNC:18391 Ensembl Gene: ENSG00000164265 OMIM ID: 606531
Drug and gene relationship at DGIdb

 

Expression of SCGB3A2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SCGB3A2 117156 228782_at -0.4556 0.1199
GSE26886 SCGB3A2 117156 228782_at 0.0973 0.5239
GSE45670 SCGB3A2 117156 228782_at -0.2897 0.0841
GSE53622 SCGB3A2 117156 18540 -0.2125 0.1493
GSE53624 SCGB3A2 117156 18540 -0.9203 0.0000
GSE63941 SCGB3A2 117156 228782_at -0.0231 0.8894
GSE77861 SCGB3A2 117156 228782_at -0.2066 0.1516
GSE97050 SCGB3A2 117156 A_23_P145006 -0.3856 0.5793
TCGA SCGB3A2 117156 RNAseq 1.6968 0.3659

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by SCGB3A2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SCGB3A2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SCGB3A2 117156 1 12 17
GSE20123 SCGB3A2 117156 1 12 17
GSE43470 SCGB3A2 117156 2 9 32
GSE46452 SCGB3A2 117156 0 27 32
GSE47630 SCGB3A2 117156 0 20 20
GSE54993 SCGB3A2 117156 9 1 60
GSE54994 SCGB3A2 117156 2 15 36
GSE60625 SCGB3A2 117156 0 0 11
GSE74703 SCGB3A2 117156 2 7 27
GSE74704 SCGB3A2 117156 1 7 12
TCGA SCGB3A2 117156 5 38 53

Total number of gains: 23; Total number of losses: 148; Total Number of normals: 317.  


 

Somatic mutations of SCGB3A2:

 

Generating mutation plots.

 

Highly correlated genes for SCGB3A2:

 

Showing top 20/77 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SCGB3A2PRH20.701901303
SCGB3A2PAQR80.674545404
SCGB3A2LPO0.662592505
SCGB3A2NNAT0.655366303
SCGB3A2ABHD50.653558303
SCGB3A2ZNF5550.64158303
SCGB3A2PRB10.641537404
SCGB3A2SCGB3A10.6407504
SCGB3A2C6orf580.638952504
SCGB3A2NPAS20.630986303
SCGB3A2PELI10.625888403
SCGB3A2EDN30.624346303
SCGB3A2RNF2080.622679403
SCGB3A2ADAM320.621274303
SCGB3A2CCNYL10.617024303
SCGB3A2PLK30.61125303
SCGB3A2INPP10.610988303
SCGB3A2ANKRD34C0.607391303
SCGB3A2ACTR3C0.606586303
SCGB3A2TSPAN80.605446404

For details and further investigation, click here