SEL1L3

 

Full name: SEL1L family member 3 Alias Symbol: KIAA0746
Type: protein-coding gene Cytoband: 4p15.2
Entrez ID: 23231 HGNC ID: HGNC:29108 Ensembl Gene: ENSG00000091490 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of SEL1L3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SEL1L3 23231 212314_at 0.9226 0.4345
GSE20347 SEL1L3 23231 212314_at 1.5027 0.0000
GSE23400 SEL1L3 23231 212314_at 0.7046 0.0000
GSE26886 SEL1L3 23231 212314_at 1.9929 0.0000
GSE29001 SEL1L3 23231 212314_at 1.2126 0.0002
GSE38129 SEL1L3 23231 212314_at 1.4107 0.0000
GSE45670 SEL1L3 23231 212314_at 0.5067 0.2235
GSE53622 SEL1L3 23231 122679 0.4651 0.0033
GSE53624 SEL1L3 23231 122679 0.4990 0.0001
GSE63941 SEL1L3 23231 212314_at -1.7802 0.0198
GSE77861 SEL1L3 23231 212311_at 1.6921 0.0016
GSE97050 SEL1L3 23231 A_23_P426021 0.6435 0.2389
SRP007169 SEL1L3 23231 RNAseq 3.3434 0.0000
SRP008496 SEL1L3 23231 RNAseq 3.2248 0.0000
SRP064894 SEL1L3 23231 RNAseq 0.3609 0.2783
SRP133303 SEL1L3 23231 RNAseq 0.2612 0.3625
SRP159526 SEL1L3 23231 RNAseq 0.7885 0.2159
SRP193095 SEL1L3 23231 RNAseq -0.1911 0.6672
SRP219564 SEL1L3 23231 RNAseq 1.5854 0.0000
TCGA SEL1L3 23231 RNAseq -0.3232 0.0017

Upregulated datasets: 8; Downregulated datasets: 1.  


 

Survival by SEL1L3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SEL1L3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SEL1L3 23231 0 18 12
GSE20123 SEL1L3 23231 0 16 14
GSE43470 SEL1L3 23231 0 15 28
GSE46452 SEL1L3 23231 1 36 22
GSE47630 SEL1L3 23231 1 19 20
GSE54993 SEL1L3 23231 10 0 60
GSE54994 SEL1L3 23231 6 12 35
GSE60625 SEL1L3 23231 0 0 11
GSE74703 SEL1L3 23231 0 13 23
GSE74704 SEL1L3 23231 0 10 10
TCGA SEL1L3 23231 11 48 37

Total number of gains: 29; Total number of losses: 187; Total Number of normals: 272.  


 

Somatic mutations of SEL1L3:

 

Generating mutation plots.

 

Highly correlated genes for SEL1L3:

 

Showing top 20/1248 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SEL1L3PPP1R350.853472303
SEL1L3NEK30.837087303
SEL1L3IDS0.794347303
SEL1L3THEM40.793094303
SEL1L3SMCR80.774624303
SEL1L3CENPV0.773644404
SEL1L3TNFAIP10.773416303
SEL1L3KREMEN10.771475303
SEL1L3LTBR0.769372303
SEL1L3LOXL1-AS10.766579303
SEL1L3PET1170.759995303
SEL1L3NUDT150.756689303
SEL1L3PLEKHA30.754032303
SEL1L3POLRMT0.753317303
SEL1L3TRMT60.75321303
SEL1L3MSTO10.752897303
SEL1L3POU2AF10.750377303
SEL1L3BIRC60.74745303
SEL1L3MCM80.744892303
SEL1L3VMA210.742986404

For details and further investigation, click here