| Full name: small glutamine rich tetratricopeptide repeat containing alpha | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 19p13 | ||
| Entrez ID: 6449 | HGNC ID: HGNC:10819 | Ensembl Gene: ENSG00000104969 | OMIM ID: 603419 |
| Drug and gene relationship at DGIdb | |||
Expression of SGTA:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SGTA | 6449 | 201396_s_at | 0.2286 | 0.2968 | |
| GSE20347 | SGTA | 6449 | 201396_s_at | 0.0887 | 0.3551 | |
| GSE23400 | SGTA | 6449 | 201396_s_at | -0.0902 | 0.0545 | |
| GSE26886 | SGTA | 6449 | 201396_s_at | 0.3056 | 0.0723 | |
| GSE29001 | SGTA | 6449 | 201396_s_at | -0.1231 | 0.4285 | |
| GSE38129 | SGTA | 6449 | 201396_s_at | 0.0931 | 0.2207 | |
| GSE45670 | SGTA | 6449 | 201396_s_at | 0.0066 | 0.9557 | |
| GSE53622 | SGTA | 6449 | 16143 | 0.1026 | 0.0808 | |
| GSE53624 | SGTA | 6449 | 16143 | 0.1480 | 0.0142 | |
| GSE63941 | SGTA | 6449 | 201396_s_at | 0.1215 | 0.6757 | |
| GSE77861 | SGTA | 6449 | 201396_s_at | 0.0653 | 0.6605 | |
| GSE97050 | SGTA | 6449 | A_33_P3359413 | -0.1463 | 0.4387 | |
| SRP007169 | SGTA | 6449 | RNAseq | -1.0022 | 0.1263 | |
| SRP008496 | SGTA | 6449 | RNAseq | -0.7180 | 0.1012 | |
| SRP064894 | SGTA | 6449 | RNAseq | -0.0574 | 0.8124 | |
| SRP133303 | SGTA | 6449 | RNAseq | -0.0104 | 0.9511 | |
| SRP159526 | SGTA | 6449 | RNAseq | 0.0711 | 0.7148 | |
| SRP193095 | SGTA | 6449 | RNAseq | -0.2349 | 0.0660 | |
| SRP219564 | SGTA | 6449 | RNAseq | -0.2434 | 0.4738 | |
| TCGA | SGTA | 6449 | RNAseq | 0.0151 | 0.7485 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SGTA expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SGTA:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SGTA | 6449 | 4 | 4 | 22 | |
| GSE20123 | SGTA | 6449 | 3 | 4 | 23 | |
| GSE43470 | SGTA | 6449 | 1 | 9 | 33 | |
| GSE46452 | SGTA | 6449 | 47 | 1 | 11 | |
| GSE47630 | SGTA | 6449 | 5 | 7 | 28 | |
| GSE54993 | SGTA | 6449 | 16 | 3 | 51 | |
| GSE54994 | SGTA | 6449 | 8 | 16 | 29 | |
| GSE60625 | SGTA | 6449 | 9 | 0 | 2 | |
| GSE74703 | SGTA | 6449 | 1 | 6 | 29 | |
| GSE74704 | SGTA | 6449 | 1 | 3 | 16 | |
| TCGA | SGTA | 6449 | 7 | 23 | 66 |
Total number of gains: 102; Total number of losses: 76; Total Number of normals: 310.
Somatic mutations of SGTA:
Generating mutation plots.
Highly correlated genes for SGTA:
Showing top 20/198 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SGTA | BRPF1 | 0.727924 | 3 | 0 | 3 |
| SGTA | ATAD3B | 0.70115 | 3 | 0 | 3 |
| SGTA | ZNF696 | 0.657329 | 4 | 0 | 3 |
| SGTA | MYPOP | 0.64401 | 3 | 0 | 3 |
| SGTA | ZMYND19 | 0.627444 | 3 | 0 | 3 |
| SGTA | KCNA10 | 0.62728 | 4 | 0 | 3 |
| SGTA | ITIH4 | 0.621224 | 4 | 0 | 3 |
| SGTA | ATG4D | 0.617751 | 4 | 0 | 3 |
| SGTA | TMEM63B | 0.615858 | 5 | 0 | 4 |
| SGTA | KRTAP10-12 | 0.615163 | 3 | 0 | 3 |
| SGTA | SPTB | 0.610784 | 3 | 0 | 3 |
| SGTA | FEM1A | 0.610609 | 3 | 0 | 3 |
| SGTA | ZNF316 | 0.610282 | 5 | 0 | 3 |
| SGTA | C21orf58 | 0.607823 | 4 | 0 | 3 |
| SGTA | PIAS4 | 0.605804 | 5 | 0 | 5 |
| SGTA | DOHH | 0.605448 | 8 | 0 | 5 |
| SGTA | CCL7 | 0.60507 | 3 | 0 | 3 |
| SGTA | TBX15 | 0.603602 | 3 | 0 | 3 |
| SGTA | GRWD1 | 0.603267 | 4 | 0 | 3 |
| SGTA | ABHD8 | 0.596605 | 5 | 0 | 4 |
For details and further investigation, click here
