SH2D4A

 

Full name: SH2 domain containing 4A Alias Symbol: FLJ20967|SH2A|PPP1R38
Type: protein-coding gene Cytoband: 8p21.3
Entrez ID: 63898 HGNC ID: HGNC:26102 Ensembl Gene: ENSG00000104611 OMIM ID: 614968
Drug and gene relationship at DGIdb

 

Expression of SH2D4A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SH2D4A 63898 219749_at -0.2966 0.7828
GSE20347 SH2D4A 63898 219749_at -0.3122 0.0097
GSE23400 SH2D4A 63898 219749_at -0.2588 0.0000
GSE26886 SH2D4A 63898 219749_at -0.9058 0.0000
GSE29001 SH2D4A 63898 219749_at -0.5205 0.0543
GSE38129 SH2D4A 63898 219749_at -0.2572 0.1253
GSE45670 SH2D4A 63898 219749_at 0.0309 0.8954
GSE53622 SH2D4A 63898 63745 -0.9603 0.0000
GSE53624 SH2D4A 63898 63745 -1.2724 0.0000
GSE63941 SH2D4A 63898 219749_at -1.3894 0.0524
GSE77861 SH2D4A 63898 219749_at -0.1565 0.2274
GSE97050 SH2D4A 63898 A_23_P169003 0.3961 0.4950
SRP007169 SH2D4A 63898 RNAseq -1.5125 0.0008
SRP008496 SH2D4A 63898 RNAseq -1.5481 0.0000
SRP064894 SH2D4A 63898 RNAseq -1.4953 0.0000
SRP133303 SH2D4A 63898 RNAseq -1.3364 0.0000
SRP159526 SH2D4A 63898 RNAseq -1.6384 0.0000
SRP193095 SH2D4A 63898 RNAseq -1.0995 0.0000
SRP219564 SH2D4A 63898 RNAseq -1.5440 0.0329
TCGA SH2D4A 63898 RNAseq -0.3097 0.0032

Upregulated datasets: 0; Downregulated datasets: 8.  


 

Survival by SH2D4A expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SH2D4A:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SH2D4A 63898 4 9 17
GSE20123 SH2D4A 63898 4 9 17
GSE43470 SH2D4A 63898 4 8 31
GSE46452 SH2D4A 63898 14 13 32
GSE47630 SH2D4A 63898 10 8 22
GSE54993 SH2D4A 63898 2 14 54
GSE54994 SH2D4A 63898 8 18 27
GSE60625 SH2D4A 63898 3 0 8
GSE74703 SH2D4A 63898 4 7 25
GSE74704 SH2D4A 63898 3 6 11
TCGA SH2D4A 63898 14 41 41

Total number of gains: 70; Total number of losses: 133; Total Number of normals: 285.  


 

Somatic mutations of SH2D4A:

 

Generating mutation plots.

 

Highly correlated genes for SH2D4A:

 

Showing top 20/1102 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SH2D4AEIF2AK30.755985303
SH2D4ASORD0.73956303
SH2D4ATLE40.730479303
SH2D4ARBM200.727031303
SH2D4AEPS150.727009403
SH2D4AZNF1010.72682505
SH2D4AWDFY10.724044404
SH2D4AC6orf1200.722882303
SH2D4ALIPH0.715363605
SH2D4AZNF4160.711932303
SH2D4AELF30.70954910010
SH2D4APRPF38A0.706326303
SH2D4ANHSL10.701472505
SH2D4ATAB30.698417606
SH2D4ALTA4H0.698085303
SH2D4AELOVL10.697755303
SH2D4ASLC10A50.693072303
SH2D4ANIPAL10.691454303
SH2D4ANAPRT0.69103303
SH2D4ARBM470.6889341109

For details and further investigation, click here