NIPAL1

 

Full name: NIPA like domain containing 1 Alias Symbol: DKFZp686A06115
Type: protein-coding gene Cytoband: 4p12
Entrez ID: 152519 HGNC ID: HGNC:27194 Ensembl Gene: ENSG00000163293 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of NIPAL1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE53622 NIPAL1 152519 41319 -1.1088 0.0000
GSE53624 NIPAL1 152519 41319 -1.2399 0.0000
GSE97050 NIPAL1 152519 A_33_P3417086 -0.1518 0.8415
SRP007169 NIPAL1 152519 RNAseq -3.6350 0.0000
SRP008496 NIPAL1 152519 RNAseq -3.4023 0.0000
SRP064894 NIPAL1 152519 RNAseq -2.7915 0.0000
SRP133303 NIPAL1 152519 RNAseq -2.0513 0.0000
SRP159526 NIPAL1 152519 RNAseq -2.9549 0.0000
SRP193095 NIPAL1 152519 RNAseq -2.3426 0.0000
SRP219564 NIPAL1 152519 RNAseq -2.9763 0.0032
TCGA NIPAL1 152519 RNAseq -0.0302 0.8805

Upregulated datasets: 0; Downregulated datasets: 9.  


 

Survival by NIPAL1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of NIPAL1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 NIPAL1 152519 1 15 14
GSE20123 NIPAL1 152519 1 15 14
GSE43470 NIPAL1 152519 0 13 30
GSE46452 NIPAL1 152519 1 37 21
GSE47630 NIPAL1 152519 1 18 21
GSE54993 NIPAL1 152519 7 0 63
GSE54994 NIPAL1 152519 4 9 40
GSE60625 NIPAL1 152519 0 0 11
GSE74703 NIPAL1 152519 0 11 25
GSE74704 NIPAL1 152519 0 9 11
TCGA NIPAL1 152519 18 30 48

Total number of gains: 33; Total number of losses: 157; Total Number of normals: 298.  


 

Somatic mutations of NIPAL1:

 

Generating mutation plots.

 

Highly correlated genes for NIPAL1:

 

Showing top 20/539 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
NIPAL1RAB250.862083303
NIPAL1ARHGAP270.853031303
NIPAL1ZDHHC130.85001303
NIPAL1SYTL10.848417303
NIPAL1MPZL30.847335303
NIPAL1DUOX10.837372303
NIPAL1NMU0.836241303
NIPAL1YOD10.833843303
NIPAL1DENND2C0.831238303
NIPAL1TMEM400.829137303
NIPAL1FUT30.826233303
NIPAL1FAM160A10.825099303
NIPAL1MPZL20.822461303
NIPAL1NUAK20.822381303
NIPAL1BARX20.821041303
NIPAL1PPP1R13L0.818371303
NIPAL1TIAM10.81405303
NIPAL1ATG9B0.813638303
NIPAL1EXPH50.80869303
NIPAL1DGKA0.805661303

For details and further investigation, click here