| Full name: synaptosome associated protein 47 | Alias Symbol: SVAP1|SNAP-47 | ||
| Type: protein-coding gene | Cytoband: 1q42.13 | ||
| Entrez ID: 116841 | HGNC ID: HGNC:30669 | Ensembl Gene: ENSG00000143740 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of SNAP47:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE53622 | SNAP47 | 116841 | 131908 | 0.6962 | 0.0000 | |
| GSE53624 | SNAP47 | 116841 | 131908 | 0.9190 | 0.0000 | |
| GSE97050 | SNAP47 | 116841 | A_33_P3211520 | 0.4690 | 0.1965 | |
| SRP007169 | SNAP47 | 116841 | RNAseq | 0.6840 | 0.0519 | |
| SRP008496 | SNAP47 | 116841 | RNAseq | 0.5889 | 0.0304 | |
| SRP064894 | SNAP47 | 116841 | RNAseq | 0.9887 | 0.0000 | |
| SRP133303 | SNAP47 | 116841 | RNAseq | 0.6470 | 0.0001 | |
| SRP159526 | SNAP47 | 116841 | RNAseq | 0.8357 | 0.0061 | |
| SRP193095 | SNAP47 | 116841 | RNAseq | 0.6903 | 0.0000 | |
| SRP219564 | SNAP47 | 116841 | RNAseq | 0.1139 | 0.8462 | |
| TCGA | SNAP47 | 116841 | RNAseq | 0.1242 | 0.0219 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SNAP47 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SNAP47:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SNAP47 | 116841 | 11 | 0 | 19 | |
| GSE20123 | SNAP47 | 116841 | 11 | 0 | 19 | |
| GSE43470 | SNAP47 | 116841 | 7 | 1 | 35 | |
| GSE46452 | SNAP47 | 116841 | 3 | 1 | 55 | |
| GSE47630 | SNAP47 | 116841 | 15 | 0 | 25 | |
| GSE54993 | SNAP47 | 116841 | 0 | 6 | 64 | |
| GSE54994 | SNAP47 | 116841 | 17 | 0 | 36 | |
| GSE60625 | SNAP47 | 116841 | 0 | 0 | 11 | |
| GSE74703 | SNAP47 | 116841 | 7 | 1 | 28 | |
| GSE74704 | SNAP47 | 116841 | 5 | 0 | 15 | |
| TCGA | SNAP47 | 116841 | 45 | 2 | 49 |
Total number of gains: 121; Total number of losses: 11; Total Number of normals: 356.
Somatic mutations of SNAP47:
Generating mutation plots.
Highly correlated genes for SNAP47:
Showing top 20/868 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SNAP47 | MAD2L2 | 0.781136 | 3 | 0 | 3 |
| SNAP47 | LAPTM4B | 0.778111 | 3 | 0 | 3 |
| SNAP47 | TUSC3 | 0.777461 | 3 | 0 | 3 |
| SNAP47 | PRKDC | 0.777453 | 3 | 0 | 3 |
| SNAP47 | LOXL2 | 0.777078 | 3 | 0 | 3 |
| SNAP47 | LRRC8D | 0.77507 | 3 | 0 | 3 |
| SNAP47 | GORAB | 0.77351 | 3 | 0 | 3 |
| SNAP47 | KIF3B | 0.772003 | 3 | 0 | 3 |
| SNAP47 | POLR2D | 0.76803 | 3 | 0 | 3 |
| SNAP47 | RNF2 | 0.767513 | 3 | 0 | 3 |
| SNAP47 | MFAP2 | 0.7674 | 3 | 0 | 3 |
| SNAP47 | RAB15 | 0.766851 | 3 | 0 | 3 |
| SNAP47 | PSMB3 | 0.765409 | 3 | 0 | 3 |
| SNAP47 | MARCKSL1 | 0.765324 | 3 | 0 | 3 |
| SNAP47 | CCT3 | 0.764191 | 3 | 0 | 3 |
| SNAP47 | SIX1 | 0.76409 | 3 | 0 | 3 |
| SNAP47 | ELK4 | 0.762856 | 3 | 0 | 3 |
| SNAP47 | WDR54 | 0.762004 | 3 | 0 | 3 |
| SNAP47 | PARP1 | 0.761941 | 4 | 0 | 4 |
| SNAP47 | CKS1B | 0.761626 | 3 | 0 | 3 |
For details and further investigation, click here
