| Full name: solute carrier family 28 member 3 | Alias Symbol: CNT3 | ||
| Type: protein-coding gene | Cytoband: 9q21.32-q21.33 | ||
| Entrez ID: 64078 | HGNC ID: HGNC:16484 | Ensembl Gene: ENSG00000197506 | OMIM ID: 608269 |
| Drug and gene relationship at DGIdb | |||
Expression of SLC28A3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SLC28A3 | 64078 | 232277_at | 1.0587 | 0.5808 | |
| GSE20347 | SLC28A3 | 64078 | 220475_at | -0.0516 | 0.8627 | |
| GSE23400 | SLC28A3 | 64078 | 220475_at | -0.0637 | 0.3181 | |
| GSE26886 | SLC28A3 | 64078 | 232277_at | -1.1307 | 0.0575 | |
| GSE29001 | SLC28A3 | 64078 | 220475_at | 0.1064 | 0.8003 | |
| GSE38129 | SLC28A3 | 64078 | 220475_at | 0.0716 | 0.8006 | |
| GSE45670 | SLC28A3 | 64078 | 232277_at | 1.9970 | 0.0000 | |
| GSE53622 | SLC28A3 | 64078 | 8171 | 0.8651 | 0.0025 | |
| GSE53624 | SLC28A3 | 64078 | 36518 | 0.3063 | 0.0142 | |
| GSE63941 | SLC28A3 | 64078 | 220475_at | 0.2856 | 0.2659 | |
| GSE77861 | SLC28A3 | 64078 | 220475_at | 0.0502 | 0.7136 | |
| GSE97050 | SLC28A3 | 64078 | A_23_P32078 | 0.6703 | 0.1816 | |
| SRP007169 | SLC28A3 | 64078 | RNAseq | -0.8406 | 0.2923 | |
| SRP008496 | SLC28A3 | 64078 | RNAseq | -0.5161 | 0.3355 | |
| SRP064894 | SLC28A3 | 64078 | RNAseq | 0.8257 | 0.0675 | |
| SRP133303 | SLC28A3 | 64078 | RNAseq | 0.3911 | 0.4263 | |
| SRP159526 | SLC28A3 | 64078 | RNAseq | -0.8266 | 0.0149 | |
| SRP193095 | SLC28A3 | 64078 | RNAseq | 0.7279 | 0.0066 | |
| SRP219564 | SLC28A3 | 64078 | RNAseq | 0.1376 | 0.8917 | |
| TCGA | SLC28A3 | 64078 | RNAseq | 1.3794 | 0.0001 |
Upregulated datasets: 2; Downregulated datasets: 0.
Survival by SLC28A3 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SLC28A3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SLC28A3 | 64078 | 5 | 10 | 15 | |
| GSE20123 | SLC28A3 | 64078 | 5 | 10 | 15 | |
| GSE43470 | SLC28A3 | 64078 | 6 | 3 | 34 | |
| GSE46452 | SLC28A3 | 64078 | 6 | 14 | 39 | |
| GSE47630 | SLC28A3 | 64078 | 1 | 18 | 21 | |
| GSE54993 | SLC28A3 | 64078 | 4 | 2 | 64 | |
| GSE54994 | SLC28A3 | 64078 | 6 | 12 | 35 | |
| GSE60625 | SLC28A3 | 64078 | 0 | 0 | 11 | |
| GSE74703 | SLC28A3 | 64078 | 5 | 3 | 28 | |
| GSE74704 | SLC28A3 | 64078 | 3 | 7 | 10 | |
| TCGA | SLC28A3 | 64078 | 20 | 28 | 48 |
Total number of gains: 61; Total number of losses: 107; Total Number of normals: 320.
Somatic mutations of SLC28A3:
Generating mutation plots.
Highly correlated genes for SLC28A3:
Showing top 20/392 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SLC28A3 | CTSH | 0.783203 | 3 | 0 | 3 |
| SLC28A3 | NUS1 | 0.761717 | 3 | 0 | 3 |
| SLC28A3 | LEMD2 | 0.759388 | 3 | 0 | 3 |
| SLC28A3 | LAPTM4B | 0.750236 | 3 | 0 | 3 |
| SLC28A3 | SLC36A1 | 0.741102 | 4 | 0 | 4 |
| SLC28A3 | TMEM107 | 0.733914 | 3 | 0 | 3 |
| SLC28A3 | NEK6 | 0.726562 | 3 | 0 | 3 |
| SLC28A3 | RAB7B | 0.720643 | 4 | 0 | 3 |
| SLC28A3 | CAPRIN1 | 0.718476 | 3 | 0 | 3 |
| SLC28A3 | TMEM19 | 0.717963 | 3 | 0 | 3 |
| SLC28A3 | USP42 | 0.713804 | 3 | 0 | 3 |
| SLC28A3 | MTHFD2 | 0.713195 | 3 | 0 | 3 |
| SLC28A3 | SNRPC | 0.710051 | 3 | 0 | 3 |
| SLC28A3 | INTS8 | 0.708048 | 3 | 0 | 3 |
| SLC28A3 | AKR1C1 | 0.703073 | 3 | 0 | 3 |
| SLC28A3 | PDE7A | 0.70277 | 3 | 0 | 3 |
| SLC28A3 | INTS6 | 0.702331 | 3 | 0 | 3 |
| SLC28A3 | SNX20 | 0.702174 | 3 | 0 | 3 |
| SLC28A3 | WDR37 | 0.702009 | 3 | 0 | 3 |
| SLC28A3 | ZNF319 | 0.701423 | 3 | 0 | 3 |
For details and further investigation, click here
