CTSH

 

Full name: cathepsin H Alias Symbol: ACC-4|ACC-5|ACC4|ACC5
Type: protein-coding gene Cytoband: 15q25.1
Entrez ID: 1512 HGNC ID: HGNC:2535 Ensembl Gene: ENSG00000103811 OMIM ID: 116820
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

CTSH involved pathways:

KEGG pathway Description View
hsa04210Apoptosis

 

Expression of CTSH:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CTSH 1512 202295_s_at 0.4259 0.5163
GSE20347 CTSH 1512 202295_s_at 0.0907 0.7622
GSE23400 CTSH 1512 202295_s_at 0.2971 0.0080
GSE26886 CTSH 1512 202295_s_at 0.4187 0.3632
GSE29001 CTSH 1512 202295_s_at 0.4050 0.3011
GSE38129 CTSH 1512 202295_s_at 0.3482 0.1782
GSE45670 CTSH 1512 202295_s_at 0.1914 0.5676
GSE53622 CTSH 1512 138084 0.3711 0.0021
GSE53624 CTSH 1512 138084 0.2056 0.0460
GSE63941 CTSH 1512 202295_s_at 2.1137 0.2249
GSE77861 CTSH 1512 202295_s_at -0.2086 0.5817
GSE97050 CTSH 1512 A_23_P14774 0.8071 0.1049
SRP007169 CTSH 1512 RNAseq -0.4348 0.4077
SRP008496 CTSH 1512 RNAseq -0.2440 0.4304
SRP064894 CTSH 1512 RNAseq 0.8612 0.0029
SRP133303 CTSH 1512 RNAseq 0.7793 0.0001
SRP159526 CTSH 1512 RNAseq 0.3078 0.5721
SRP193095 CTSH 1512 RNAseq 0.0914 0.7159
SRP219564 CTSH 1512 RNAseq 1.1196 0.0017
TCGA CTSH 1512 RNAseq -0.1622 0.0774

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by CTSH expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CTSH:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CTSH 1512 7 1 22
GSE20123 CTSH 1512 7 1 22
GSE43470 CTSH 1512 4 5 34
GSE46452 CTSH 1512 3 7 49
GSE47630 CTSH 1512 8 10 22
GSE54993 CTSH 1512 5 6 59
GSE54994 CTSH 1512 5 6 42
GSE60625 CTSH 1512 4 0 7
GSE74703 CTSH 1512 4 3 29
GSE74704 CTSH 1512 3 1 16
TCGA CTSH 1512 14 15 67

Total number of gains: 64; Total number of losses: 55; Total Number of normals: 369.  


 

Somatic mutations of CTSH:

 

Generating mutation plots.

 

Highly correlated genes for CTSH:

 

Showing top 20/250 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CTSHSLC28A30.783203303
CTSHPREX10.779135303
CTSHTCP11L10.741239303
CTSHAKIP10.734159303
CTSHFAM49A0.717462404
CTSHTBC1D20.711943303
CTSHTGFB10.704935303
CTSHCERKL0.702653303
CTSHFLOT20.702053303
CTSHCDT10.699491303
CTSHGLI30.69905303
CTSHA1BG0.689238303
CTSHFYN0.687544403
CTSHAK20.681938303
CTSHWDR860.681902303
CTSHCBX10.681201303
CTSHVNN20.67641403
CTSHRASAL30.674356303
CTSHFKBP100.670625303
CTSHNDN0.6589303

For details and further investigation, click here