| Full name: SMYD family member 5 | Alias Symbol: RRG1|NN8-4AG|ZMYND23 | ||
| Type: protein-coding gene | Cytoband: 2p13.2 | ||
| Entrez ID: 10322 | HGNC ID: HGNC:16258 | Ensembl Gene: ENSG00000135632 | OMIM ID: |
Expression of SMYD5:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SMYD5 | 10322 | 209516_at | 0.7380 | 0.0331 | |
| GSE20347 | SMYD5 | 10322 | 209516_at | 0.5013 | 0.0001 | |
| GSE23400 | SMYD5 | 10322 | 209516_at | 0.1232 | 0.0025 | |
| GSE26886 | SMYD5 | 10322 | 209516_at | 0.6577 | 0.0000 | |
| GSE29001 | SMYD5 | 10322 | 209516_at | -0.0417 | 0.7809 | |
| GSE38129 | SMYD5 | 10322 | 209516_at | 0.4743 | 0.0004 | |
| GSE45670 | SMYD5 | 10322 | 209516_at | 0.1305 | 0.2764 | |
| GSE53622 | SMYD5 | 10322 | 97525 | 0.7228 | 0.0000 | |
| GSE53624 | SMYD5 | 10322 | 97525 | 0.7415 | 0.0000 | |
| GSE63941 | SMYD5 | 10322 | 209516_at | 1.1620 | 0.0003 | |
| GSE77861 | SMYD5 | 10322 | 209516_at | 0.2738 | 0.1327 | |
| GSE97050 | SMYD5 | 10322 | A_23_P91015 | 0.6050 | 0.1241 | |
| SRP007169 | SMYD5 | 10322 | RNAseq | 1.3148 | 0.0081 | |
| SRP008496 | SMYD5 | 10322 | RNAseq | 0.9410 | 0.0024 | |
| SRP064894 | SMYD5 | 10322 | RNAseq | 0.5228 | 0.0033 | |
| SRP133303 | SMYD5 | 10322 | RNAseq | 0.7263 | 0.0000 | |
| SRP159526 | SMYD5 | 10322 | RNAseq | 0.9928 | 0.0034 | |
| SRP193095 | SMYD5 | 10322 | RNAseq | 0.6568 | 0.0000 | |
| SRP219564 | SMYD5 | 10322 | RNAseq | 0.9215 | 0.0095 | |
| TCGA | SMYD5 | 10322 | RNAseq | 0.2412 | 0.0000 |
Upregulated datasets: 2; Downregulated datasets: 0.
Survival by SMYD5 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SMYD5:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SMYD5 | 10322 | 11 | 1 | 18 | |
| GSE20123 | SMYD5 | 10322 | 11 | 1 | 18 | |
| GSE43470 | SMYD5 | 10322 | 4 | 0 | 39 | |
| GSE46452 | SMYD5 | 10322 | 2 | 3 | 54 | |
| GSE47630 | SMYD5 | 10322 | 7 | 0 | 33 | |
| GSE54993 | SMYD5 | 10322 | 0 | 6 | 64 | |
| GSE54994 | SMYD5 | 10322 | 11 | 0 | 42 | |
| GSE60625 | SMYD5 | 10322 | 0 | 3 | 8 | |
| GSE74703 | SMYD5 | 10322 | 4 | 0 | 32 | |
| GSE74704 | SMYD5 | 10322 | 9 | 0 | 11 | |
| TCGA | SMYD5 | 10322 | 38 | 2 | 56 |
Total number of gains: 97; Total number of losses: 16; Total Number of normals: 375.
Somatic mutations of SMYD5:
Generating mutation plots.
Highly correlated genes for SMYD5:
Showing top 20/1663 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SMYD5 | RNF26 | 0.841204 | 3 | 0 | 3 |
| SMYD5 | PYCR2 | 0.793486 | 3 | 0 | 3 |
| SMYD5 | SLC35B2 | 0.76947 | 3 | 0 | 3 |
| SMYD5 | RAB34 | 0.766887 | 3 | 0 | 3 |
| SMYD5 | SIX4 | 0.764927 | 6 | 0 | 6 |
| SMYD5 | SAAL1 | 0.759405 | 5 | 0 | 5 |
| SMYD5 | LRRC58 | 0.759275 | 3 | 0 | 3 |
| SMYD5 | SLC39A3 | 0.754281 | 3 | 0 | 3 |
| SMYD5 | SNAP47 | 0.747743 | 3 | 0 | 3 |
| SMYD5 | TMEM63B | 0.747525 | 3 | 0 | 3 |
| SMYD5 | ANAPC1 | 0.739223 | 3 | 0 | 3 |
| SMYD5 | TSN | 0.734513 | 4 | 0 | 4 |
| SMYD5 | ACTL6A | 0.734443 | 8 | 0 | 8 |
| SMYD5 | FADS1 | 0.732834 | 3 | 0 | 3 |
| SMYD5 | SCNM1 | 0.729277 | 3 | 0 | 3 |
| SMYD5 | ZC3HC1 | 0.726746 | 5 | 0 | 5 |
| SMYD5 | KIAA0100 | 0.72661 | 3 | 0 | 3 |
| SMYD5 | FKTN | 0.724776 | 3 | 0 | 3 |
| SMYD5 | NF1 | 0.720657 | 3 | 0 | 3 |
| SMYD5 | RRP36 | 0.718861 | 4 | 0 | 4 |
For details and further investigation, click here
