| Full name: small nuclear RNA activating complex polypeptide 5 | Alias Symbol: SNAP19 | ||
| Type: protein-coding gene | Cytoband: 15q22.31 | ||
| Entrez ID: 10302 | HGNC ID: HGNC:15484 | Ensembl Gene: ENSG00000174446 | OMIM ID: 605979 |
| Drug and gene relationship at DGIdb | |||
Screen Evidence:
| |||
Expression of SNAPC5:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SNAPC5 | 10302 | 213203_at | -0.1949 | 0.6397 | |
| GSE20347 | SNAPC5 | 10302 | 213203_at | 0.4444 | 0.0076 | |
| GSE23400 | SNAPC5 | 10302 | 213203_at | 0.0961 | 0.1696 | |
| GSE26886 | SNAPC5 | 10302 | 213203_at | 0.5478 | 0.0001 | |
| GSE29001 | SNAPC5 | 10302 | 213203_at | 0.3581 | 0.1405 | |
| GSE38129 | SNAPC5 | 10302 | 213203_at | 0.2585 | 0.0512 | |
| GSE45670 | SNAPC5 | 10302 | 213203_at | -0.0427 | 0.7601 | |
| GSE53622 | SNAPC5 | 10302 | 90184 | 0.2864 | 0.0005 | |
| GSE53624 | SNAPC5 | 10302 | 90184 | 0.3429 | 0.0000 | |
| GSE63941 | SNAPC5 | 10302 | 213203_at | 0.2402 | 0.6315 | |
| GSE77861 | SNAPC5 | 10302 | 213203_at | 0.5133 | 0.1414 | |
| GSE97050 | SNAPC5 | 10302 | A_23_P21776 | -0.4100 | 0.1531 | |
| SRP007169 | SNAPC5 | 10302 | RNAseq | -0.0572 | 0.9008 | |
| SRP008496 | SNAPC5 | 10302 | RNAseq | 0.0726 | 0.8186 | |
| SRP064894 | SNAPC5 | 10302 | RNAseq | 0.0351 | 0.8278 | |
| SRP133303 | SNAPC5 | 10302 | RNAseq | 0.2596 | 0.0743 | |
| SRP159526 | SNAPC5 | 10302 | RNAseq | 0.4521 | 0.0686 | |
| SRP193095 | SNAPC5 | 10302 | RNAseq | 0.1739 | 0.0661 | |
| SRP219564 | SNAPC5 | 10302 | RNAseq | 0.0477 | 0.9015 | |
| TCGA | SNAPC5 | 10302 | RNAseq | 0.0224 | 0.7962 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SNAPC5 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SNAPC5:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SNAPC5 | 10302 | 7 | 3 | 20 | |
| GSE20123 | SNAPC5 | 10302 | 7 | 3 | 20 | |
| GSE43470 | SNAPC5 | 10302 | 4 | 6 | 33 | |
| GSE46452 | SNAPC5 | 10302 | 3 | 7 | 49 | |
| GSE47630 | SNAPC5 | 10302 | 8 | 10 | 22 | |
| GSE54993 | SNAPC5 | 10302 | 5 | 6 | 59 | |
| GSE54994 | SNAPC5 | 10302 | 6 | 7 | 40 | |
| GSE60625 | SNAPC5 | 10302 | 4 | 0 | 7 | |
| GSE74703 | SNAPC5 | 10302 | 4 | 3 | 29 | |
| GSE74704 | SNAPC5 | 10302 | 3 | 3 | 14 | |
| TCGA | SNAPC5 | 10302 | 9 | 16 | 71 |
Total number of gains: 60; Total number of losses: 64; Total Number of normals: 364.
Somatic mutations of SNAPC5:
Generating mutation plots.
Highly correlated genes for SNAPC5:
Showing top 20/652 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SNAPC5 | MRPL48 | 0.748638 | 3 | 0 | 3 |
| SNAPC5 | PRDX2 | 0.734439 | 3 | 0 | 3 |
| SNAPC5 | UXT | 0.728153 | 3 | 0 | 3 |
| SNAPC5 | RRAS2 | 0.726982 | 3 | 0 | 3 |
| SNAPC5 | AOC3 | 0.726602 | 3 | 0 | 3 |
| SNAPC5 | HMCN1 | 0.725346 | 3 | 0 | 3 |
| SNAPC5 | INTS9 | 0.723249 | 3 | 0 | 3 |
| SNAPC5 | DNAJC27 | 0.722587 | 4 | 0 | 3 |
| SNAPC5 | WDR35 | 0.717479 | 3 | 0 | 3 |
| SNAPC5 | UNG | 0.707279 | 3 | 0 | 3 |
| SNAPC5 | ITGB8 | 0.703892 | 3 | 0 | 3 |
| SNAPC5 | ANKRD10 | 0.701885 | 4 | 0 | 3 |
| SNAPC5 | ARIH1 | 0.69826 | 4 | 0 | 4 |
| SNAPC5 | LRRC58 | 0.697458 | 3 | 0 | 3 |
| SNAPC5 | SENP6 | 0.692999 | 6 | 0 | 5 |
| SNAPC5 | TES | 0.692567 | 4 | 0 | 4 |
| SNAPC5 | PAXIP1-AS1 | 0.692137 | 4 | 0 | 3 |
| SNAPC5 | ZNF25 | 0.689731 | 3 | 0 | 3 |
| SNAPC5 | PPP2R2D | 0.687159 | 3 | 0 | 3 |
| SNAPC5 | FNIP2 | 0.684082 | 3 | 0 | 3 |
For details and further investigation, click here
