| Full name: sorting nexin 17 | Alias Symbol: KIAA0064 | ||
| Type: protein-coding gene | Cytoband: 2p23.3 | ||
| Entrez ID: 9784 | HGNC ID: HGNC:14979 | Ensembl Gene: ENSG00000115234 | OMIM ID: 605963 |
| Drug and gene relationship at DGIdb | |||
Expression of SNX17:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SNX17 | 9784 | 200991_s_at | -0.0514 | 0.9318 | |
| GSE20347 | SNX17 | 9784 | 200991_s_at | -0.1887 | 0.3250 | |
| GSE23400 | SNX17 | 9784 | 200991_s_at | -0.0954 | 0.0897 | |
| GSE26886 | SNX17 | 9784 | 200991_s_at | -0.8227 | 0.0002 | |
| GSE29001 | SNX17 | 9784 | 200991_s_at | -0.2918 | 0.5583 | |
| GSE38129 | SNX17 | 9784 | 200991_s_at | -0.1431 | 0.2962 | |
| GSE45670 | SNX17 | 9784 | 200991_s_at | -0.0287 | 0.8762 | |
| GSE53622 | SNX17 | 9784 | 8705 | 0.0254 | 0.7022 | |
| GSE53624 | SNX17 | 9784 | 8705 | -0.0933 | 0.1330 | |
| GSE63941 | SNX17 | 9784 | 200991_s_at | 0.3967 | 0.3009 | |
| GSE77861 | SNX17 | 9784 | 200991_s_at | -0.0523 | 0.6690 | |
| GSE97050 | SNX17 | 9784 | A_33_P3250068 | -0.1008 | 0.6928 | |
| SRP007169 | SNX17 | 9784 | RNAseq | -0.8958 | 0.0033 | |
| SRP008496 | SNX17 | 9784 | RNAseq | -0.6537 | 0.0007 | |
| SRP064894 | SNX17 | 9784 | RNAseq | 0.1123 | 0.5842 | |
| SRP133303 | SNX17 | 9784 | RNAseq | -0.0025 | 0.9824 | |
| SRP159526 | SNX17 | 9784 | RNAseq | 0.1242 | 0.5435 | |
| SRP193095 | SNX17 | 9784 | RNAseq | -0.1605 | 0.0809 | |
| SRP219564 | SNX17 | 9784 | RNAseq | -0.0097 | 0.9715 | |
| TCGA | SNX17 | 9784 | RNAseq | 0.0333 | 0.4544 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SNX17 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SNX17:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SNX17 | 9784 | 11 | 2 | 17 | |
| GSE20123 | SNX17 | 9784 | 11 | 2 | 17 | |
| GSE43470 | SNX17 | 9784 | 3 | 1 | 39 | |
| GSE46452 | SNX17 | 9784 | 2 | 4 | 53 | |
| GSE47630 | SNX17 | 9784 | 8 | 0 | 32 | |
| GSE54993 | SNX17 | 9784 | 0 | 6 | 64 | |
| GSE54994 | SNX17 | 9784 | 10 | 0 | 43 | |
| GSE60625 | SNX17 | 9784 | 0 | 3 | 8 | |
| GSE74703 | SNX17 | 9784 | 3 | 0 | 33 | |
| GSE74704 | SNX17 | 9784 | 9 | 1 | 10 | |
| TCGA | SNX17 | 9784 | 37 | 2 | 57 |
Total number of gains: 94; Total number of losses: 21; Total Number of normals: 373.
Somatic mutations of SNX17:
Generating mutation plots.
Highly correlated genes for SNX17:
Showing top 20/470 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SNX17 | ALAS1 | 0.807399 | 4 | 0 | 4 |
| SNX17 | LRRC28 | 0.781168 | 3 | 0 | 3 |
| SNX17 | AIFM1 | 0.764732 | 4 | 0 | 4 |
| SNX17 | FBXL5 | 0.758993 | 3 | 0 | 3 |
| SNX17 | CTTNBP2NL | 0.75427 | 3 | 0 | 3 |
| SNX17 | SLC35A3 | 0.752994 | 3 | 0 | 3 |
| SNX17 | GPD2 | 0.75053 | 3 | 0 | 3 |
| SNX17 | RSL24D1 | 0.744006 | 3 | 0 | 3 |
| SNX17 | NAP1L4 | 0.73807 | 3 | 0 | 3 |
| SNX17 | CYFIP1 | 0.731477 | 5 | 0 | 5 |
| SNX17 | ZKSCAN5 | 0.728534 | 3 | 0 | 3 |
| SNX17 | NOTCH2 | 0.726692 | 3 | 0 | 3 |
| SNX17 | NAA20 | 0.725406 | 3 | 0 | 3 |
| SNX17 | SPRYD4 | 0.723165 | 3 | 0 | 3 |
| SNX17 | ANKRD44 | 0.722238 | 3 | 0 | 3 |
| SNX17 | UQCR10 | 0.720473 | 4 | 0 | 4 |
| SNX17 | CCDC117 | 0.717184 | 3 | 0 | 3 |
| SNX17 | FAM122A | 0.713077 | 3 | 0 | 3 |
| SNX17 | CGGBP1 | 0.712714 | 3 | 0 | 3 |
| SNX17 | ATP6V0B | 0.709771 | 3 | 0 | 3 |
For details and further investigation, click here
