Full name: serine and arginine rich splicing factor 4 | Alias Symbol: SRP75 | ||
Type: protein-coding gene | Cytoband: 1p35.3 | ||
Entrez ID: 6429 | HGNC ID: HGNC:10786 | Ensembl Gene: ENSG00000116350 | OMIM ID: 601940 |
Drug and gene relationship at DGIdb |
SRSF4 involved pathways:
KEGG pathway | Description | View |
---|---|---|
hsa05168 | Herpes simplex infection |
Expression of SRSF4:
Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
---|---|---|---|---|---|---|
GSE17351 | SRSF4 | 6429 | 201696_at | -0.1697 | 0.5825 | |
GSE20347 | SRSF4 | 6429 | 201696_at | -0.0995 | 0.4504 | |
GSE23400 | SRSF4 | 6429 | 201696_at | 0.1266 | 0.0589 | |
GSE26886 | SRSF4 | 6429 | 201696_at | -0.2336 | 0.2039 | |
GSE29001 | SRSF4 | 6429 | 201696_at | 0.0768 | 0.6864 | |
GSE38129 | SRSF4 | 6429 | 201696_at | -0.1595 | 0.1157 | |
GSE45670 | SRSF4 | 6429 | 201696_at | -0.2248 | 0.0240 | |
GSE53622 | SRSF4 | 6429 | 8655 | -0.1282 | 0.0052 | |
GSE53624 | SRSF4 | 6429 | 8655 | 0.0009 | 0.9875 | |
GSE63941 | SRSF4 | 6429 | 201696_at | 0.1712 | 0.5879 | |
GSE77861 | SRSF4 | 6429 | 201696_at | 0.0105 | 0.9629 | |
GSE97050 | SRSF4 | 6429 | A_23_P126197 | -0.4049 | 0.1726 | |
SRP007169 | SRSF4 | 6429 | RNAseq | 0.2094 | 0.6157 | |
SRP008496 | SRSF4 | 6429 | RNAseq | 0.1075 | 0.7159 | |
SRP064894 | SRSF4 | 6429 | RNAseq | 0.0858 | 0.5914 | |
SRP133303 | SRSF4 | 6429 | RNAseq | 0.0277 | 0.8261 | |
SRP159526 | SRSF4 | 6429 | RNAseq | -0.0331 | 0.9155 | |
SRP193095 | SRSF4 | 6429 | RNAseq | -0.0614 | 0.5698 | |
SRP219564 | SRSF4 | 6429 | RNAseq | -0.1089 | 0.5968 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SRSF4 expression:
Note: Click image to view full size file.
Copy number change of SRSF4:
Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
---|---|---|---|---|---|---|
GSE15526 | SRSF4 | 6429 | 0 | 6 | 24 | |
GSE20123 | SRSF4 | 6429 | 0 | 5 | 25 | |
GSE43470 | SRSF4 | 6429 | 3 | 6 | 34 | |
GSE46452 | SRSF4 | 6429 | 5 | 1 | 53 | |
GSE47630 | SRSF4 | 6429 | 8 | 3 | 29 | |
GSE54993 | SRSF4 | 6429 | 2 | 1 | 67 | |
GSE54994 | SRSF4 | 6429 | 10 | 4 | 39 | |
GSE60625 | SRSF4 | 6429 | 0 | 0 | 11 | |
GSE74703 | SRSF4 | 6429 | 2 | 4 | 30 | |
GSE74704 | SRSF4 | 6429 | 0 | 0 | 20 | |
TCGA | SRSF4 | 6429 | 11 | 21 | 64 |
Total number of gains: 41; Total number of losses: 51; Total Number of normals: 396.
Somatic mutations of SRSF4:
Generating mutation plots.
Highly correlated genes for SRSF4:
Showing top 20/228 corelated genes with mean PCC>0.5.
Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
---|---|---|---|---|---|
SRSF4 | ARIH2 | 0.785335 | 3 | 0 | 3 |
SRSF4 | DDX17 | 0.745365 | 3 | 0 | 3 |
SRSF4 | NDUFA8 | 0.740307 | 3 | 0 | 3 |
SRSF4 | PTAR1 | 0.739001 | 4 | 0 | 4 |
SRSF4 | FRY | 0.71726 | 3 | 0 | 3 |
SRSF4 | LSM11 | 0.713359 | 4 | 0 | 3 |
SRSF4 | PINK1 | 0.705297 | 3 | 0 | 3 |
SRSF4 | UBQLN1 | 0.702261 | 3 | 0 | 3 |
SRSF4 | MACROD2 | 0.692621 | 3 | 0 | 3 |
SRSF4 | RPL37A | 0.684681 | 3 | 0 | 3 |
SRSF4 | MKRN2 | 0.683682 | 3 | 0 | 3 |
SRSF4 | SERTAD1 | 0.682325 | 3 | 0 | 3 |
SRSF4 | XK | 0.681579 | 4 | 0 | 3 |
SRSF4 | ZNF664 | 0.679051 | 3 | 0 | 3 |
SRSF4 | HP1BP3 | 0.676325 | 5 | 0 | 3 |
SRSF4 | NACC2 | 0.67224 | 5 | 0 | 4 |
SRSF4 | ZYG11B | 0.671405 | 5 | 0 | 4 |
SRSF4 | HNRNPA1 | 0.671337 | 4 | 0 | 3 |
SRSF4 | ARL6IP4 | 0.669507 | 4 | 0 | 3 |
SRSF4 | ZNF844 | 0.668951 | 3 | 0 | 3 |
For details and further investigation, click here