| Full name: SS18L1 subunit of BAF chromatin remodeling complex | Alias Symbol: KIAA0693|CREST | ||
| Type: protein-coding gene | Cytoband: 20q13.33 | ||
| Entrez ID: 26039 | HGNC ID: HGNC:15592 | Ensembl Gene: ENSG00000184402 | OMIM ID: 606472 |
| Drug and gene relationship at DGIdb | |||
Expression of SS18L1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SS18L1 | 26039 | 213140_s_at | 0.8536 | 0.1185 | |
| GSE20347 | SS18L1 | 26039 | 213140_s_at | 0.4577 | 0.0016 | |
| GSE23400 | SS18L1 | 26039 | 213140_s_at | 0.4898 | 0.0000 | |
| GSE26886 | SS18L1 | 26039 | 213140_s_at | -0.2224 | 0.4556 | |
| GSE29001 | SS18L1 | 26039 | 213140_s_at | 0.6996 | 0.0309 | |
| GSE38129 | SS18L1 | 26039 | 213140_s_at | 0.5004 | 0.0012 | |
| GSE45670 | SS18L1 | 26039 | 213140_s_at | 0.4822 | 0.0055 | |
| GSE53622 | SS18L1 | 26039 | 9794 | 0.2023 | 0.0110 | |
| GSE53624 | SS18L1 | 26039 | 9794 | 0.2693 | 0.0001 | |
| GSE63941 | SS18L1 | 26039 | 213140_s_at | 0.1276 | 0.8602 | |
| GSE77861 | SS18L1 | 26039 | 213140_s_at | 0.3960 | 0.1287 | |
| GSE97050 | SS18L1 | 26039 | A_23_P423926 | 0.3076 | 0.2968 | |
| SRP007169 | SS18L1 | 26039 | RNAseq | 0.2197 | 0.5760 | |
| SRP008496 | SS18L1 | 26039 | RNAseq | 0.1748 | 0.5260 | |
| SRP064894 | SS18L1 | 26039 | RNAseq | 0.4876 | 0.0199 | |
| SRP133303 | SS18L1 | 26039 | RNAseq | 0.3327 | 0.0037 | |
| SRP159526 | SS18L1 | 26039 | RNAseq | 0.4184 | 0.3406 | |
| SRP193095 | SS18L1 | 26039 | RNAseq | 0.1687 | 0.0839 | |
| SRP219564 | SS18L1 | 26039 | RNAseq | 0.4593 | 0.3192 | |
| TCGA | SS18L1 | 26039 | RNAseq | -0.0393 | 0.4914 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SS18L1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SS18L1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SS18L1 | 26039 | 13 | 2 | 15 | |
| GSE20123 | SS18L1 | 26039 | 14 | 2 | 14 | |
| GSE43470 | SS18L1 | 26039 | 11 | 1 | 31 | |
| GSE46452 | SS18L1 | 26039 | 35 | 0 | 24 | |
| GSE47630 | SS18L1 | 26039 | 25 | 1 | 14 | |
| GSE54993 | SS18L1 | 26039 | 0 | 17 | 53 | |
| GSE54994 | SS18L1 | 26039 | 29 | 0 | 24 | |
| GSE60625 | SS18L1 | 26039 | 0 | 0 | 11 | |
| GSE74703 | SS18L1 | 26039 | 10 | 0 | 26 | |
| GSE74704 | SS18L1 | 26039 | 11 | 0 | 9 | |
| TCGA | SS18L1 | 26039 | 43 | 4 | 49 |
Total number of gains: 191; Total number of losses: 27; Total Number of normals: 270.
Somatic mutations of SS18L1:
Generating mutation plots.
Highly correlated genes for SS18L1:
Showing top 20/787 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SS18L1 | IARS2 | 0.818842 | 3 | 0 | 3 |
| SS18L1 | UXS1 | 0.817099 | 3 | 0 | 3 |
| SS18L1 | ZBED6 | 0.783099 | 3 | 0 | 3 |
| SS18L1 | ZNF664 | 0.777522 | 3 | 0 | 3 |
| SS18L1 | GLRX2 | 0.776384 | 3 | 0 | 3 |
| SS18L1 | OSGEP | 0.773978 | 3 | 0 | 3 |
| SS18L1 | POLR2K | 0.773593 | 3 | 0 | 3 |
| SS18L1 | PDCD2L | 0.772726 | 3 | 0 | 3 |
| SS18L1 | MRPL9 | 0.768183 | 3 | 0 | 3 |
| SS18L1 | DNAH14 | 0.762754 | 3 | 0 | 3 |
| SS18L1 | PET117 | 0.759067 | 4 | 0 | 4 |
| SS18L1 | ZNF830 | 0.739129 | 3 | 0 | 3 |
| SS18L1 | LYAR | 0.734655 | 4 | 0 | 3 |
| SS18L1 | C8orf76 | 0.728791 | 3 | 0 | 3 |
| SS18L1 | MED10 | 0.727356 | 3 | 0 | 3 |
| SS18L1 | CPNE2 | 0.726243 | 3 | 0 | 3 |
| SS18L1 | METTL14 | 0.718095 | 3 | 0 | 3 |
| SS18L1 | EBAG9 | 0.71748 | 3 | 0 | 3 |
| SS18L1 | EPRS | 0.717334 | 4 | 0 | 4 |
| SS18L1 | CPLX1 | 0.711465 | 3 | 0 | 3 |
For details and further investigation, click here
