| Full name: synaptopodin 2 like | Alias Symbol: FLJ12921 | ||
| Type: protein-coding gene | Cytoband: 10q22.2 | ||
| Entrez ID: 79933 | HGNC ID: HGNC:23532 | Ensembl Gene: ENSG00000166317 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of SYNPO2L:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SYNPO2L | 79933 | 243313_at | -1.0604 | 0.2312 | |
| GSE20347 | SYNPO2L | 79933 | 219804_at | -1.9417 | 0.0000 | |
| GSE23400 | SYNPO2L | 79933 | 219804_at | -1.0075 | 0.0000 | |
| GSE26886 | SYNPO2L | 79933 | 243313_at | -4.1560 | 0.0000 | |
| GSE29001 | SYNPO2L | 79933 | 219804_at | -4.7270 | 0.0000 | |
| GSE38129 | SYNPO2L | 79933 | 219804_at | -1.9504 | 0.0000 | |
| GSE45670 | SYNPO2L | 79933 | 219804_at | -2.1515 | 0.0191 | |
| GSE53622 | SYNPO2L | 79933 | 101761 | -2.5776 | 0.0000 | |
| GSE53624 | SYNPO2L | 79933 | 101761 | -3.2797 | 0.0000 | |
| GSE63941 | SYNPO2L | 79933 | 243313_at | 0.6533 | 0.0210 | |
| GSE77861 | SYNPO2L | 79933 | 243313_at | -0.9379 | 0.0068 | |
| GSE97050 | SYNPO2L | 79933 | A_23_P355517 | -1.2383 | 0.0780 | |
| SRP007169 | SYNPO2L | 79933 | RNAseq | -3.7352 | 0.0000 | |
| SRP064894 | SYNPO2L | 79933 | RNAseq | -5.7120 | 0.0000 | |
| SRP133303 | SYNPO2L | 79933 | RNAseq | -3.0096 | 0.0000 | |
| SRP159526 | SYNPO2L | 79933 | RNAseq | -5.2467 | 0.0000 | |
| SRP193095 | SYNPO2L | 79933 | RNAseq | -3.3821 | 0.0000 | |
| SRP219564 | SYNPO2L | 79933 | RNAseq | -3.9013 | 0.0004 | |
| TCGA | SYNPO2L | 79933 | RNAseq | -0.4949 | 0.3410 |
Upregulated datasets: 0; Downregulated datasets: 14.
Survival by SYNPO2L expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SYNPO2L:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SYNPO2L | 79933 | 3 | 4 | 23 | |
| GSE20123 | SYNPO2L | 79933 | 3 | 3 | 24 | |
| GSE43470 | SYNPO2L | 79933 | 2 | 8 | 33 | |
| GSE46452 | SYNPO2L | 79933 | 0 | 11 | 48 | |
| GSE47630 | SYNPO2L | 79933 | 2 | 14 | 24 | |
| GSE54993 | SYNPO2L | 79933 | 7 | 0 | 63 | |
| GSE54994 | SYNPO2L | 79933 | 2 | 10 | 41 | |
| GSE60625 | SYNPO2L | 79933 | 0 | 0 | 11 | |
| GSE74703 | SYNPO2L | 79933 | 2 | 5 | 29 | |
| GSE74704 | SYNPO2L | 79933 | 1 | 1 | 18 | |
| TCGA | SYNPO2L | 79933 | 11 | 23 | 62 |
Total number of gains: 33; Total number of losses: 79; Total Number of normals: 376.
Somatic mutations of SYNPO2L:
Generating mutation plots.
Highly correlated genes for SYNPO2L:
Showing top 20/1163 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SYNPO2L | GYS2 | 0.843341 | 10 | 0 | 10 |
| SYNPO2L | SFTA2 | 0.838519 | 4 | 0 | 4 |
| SYNPO2L | RAET1E | 0.816902 | 7 | 0 | 7 |
| SYNPO2L | SPINK7 | 0.81473 | 7 | 0 | 7 |
| SYNPO2L | FLG | 0.814148 | 11 | 0 | 11 |
| SYNPO2L | GRPEL2 | 0.81129 | 6 | 0 | 6 |
| SYNPO2L | YOD1 | 0.808034 | 10 | 0 | 10 |
| SYNPO2L | CYSRT1 | 0.805138 | 6 | 0 | 6 |
| SYNPO2L | C18orf25 | 0.804043 | 10 | 0 | 10 |
| SYNPO2L | KPRP | 0.802856 | 3 | 0 | 3 |
| SYNPO2L | VSIG10L | 0.802279 | 7 | 0 | 7 |
| SYNPO2L | MMEL1 | 0.799623 | 4 | 0 | 4 |
| SYNPO2L | PRSS27 | 0.798937 | 7 | 0 | 7 |
| SYNPO2L | ANKRD24 | 0.798905 | 3 | 0 | 3 |
| SYNPO2L | RANBP9 | 0.798676 | 10 | 0 | 10 |
| SYNPO2L | MXD1 | 0.798085 | 11 | 0 | 11 |
| SYNPO2L | IQCF1 | 0.797606 | 4 | 0 | 4 |
| SYNPO2L | HCG22 | 0.797255 | 6 | 0 | 6 |
| SYNPO2L | C3orf20 | 0.793558 | 3 | 0 | 3 |
| SYNPO2L | SCNN1B | 0.789807 | 11 | 0 | 11 |
For details and further investigation, click here
