| Full name: synaptotagmin 17 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 16p12.3 | ||
| Entrez ID: 51760 | HGNC ID: HGNC:24119 | Ensembl Gene: ENSG00000103528 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of SYT17:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SYT17 | 51760 | 205613_at | 0.1863 | 0.8519 | |
| GSE20347 | SYT17 | 51760 | 205613_at | 0.3796 | 0.1017 | |
| GSE23400 | SYT17 | 51760 | 205613_at | 0.0237 | 0.7733 | |
| GSE26886 | SYT17 | 51760 | 205613_at | 0.4449 | 0.1853 | |
| GSE29001 | SYT17 | 51760 | 205613_at | -0.2012 | 0.6520 | |
| GSE38129 | SYT17 | 51760 | 205613_at | 0.3121 | 0.1347 | |
| GSE45670 | SYT17 | 51760 | 205613_at | 0.1052 | 0.7616 | |
| GSE53622 | SYT17 | 51760 | 19346 | 0.2247 | 0.2007 | |
| GSE53624 | SYT17 | 51760 | 19346 | -0.2806 | 0.0348 | |
| GSE63941 | SYT17 | 51760 | 205613_at | 2.2648 | 0.0075 | |
| GSE77861 | SYT17 | 51760 | 205613_at | 0.0526 | 0.8557 | |
| GSE97050 | SYT17 | 51760 | A_23_P163697 | 0.2783 | 0.5294 | |
| SRP007169 | SYT17 | 51760 | RNAseq | 0.4779 | 0.3420 | |
| SRP064894 | SYT17 | 51760 | RNAseq | -0.3861 | 0.2750 | |
| SRP133303 | SYT17 | 51760 | RNAseq | 0.8132 | 0.0406 | |
| SRP159526 | SYT17 | 51760 | RNAseq | 0.4806 | 0.4044 | |
| SRP193095 | SYT17 | 51760 | RNAseq | 0.3936 | 0.0580 | |
| SRP219564 | SYT17 | 51760 | RNAseq | 0.8270 | 0.0364 | |
| TCGA | SYT17 | 51760 | RNAseq | -0.1748 | 0.3965 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by SYT17 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SYT17:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SYT17 | 51760 | 5 | 3 | 22 | |
| GSE20123 | SYT17 | 51760 | 5 | 2 | 23 | |
| GSE43470 | SYT17 | 51760 | 3 | 3 | 37 | |
| GSE46452 | SYT17 | 51760 | 38 | 1 | 20 | |
| GSE47630 | SYT17 | 51760 | 11 | 6 | 23 | |
| GSE54993 | SYT17 | 51760 | 3 | 5 | 62 | |
| GSE54994 | SYT17 | 51760 | 3 | 10 | 40 | |
| GSE60625 | SYT17 | 51760 | 4 | 0 | 7 | |
| GSE74703 | SYT17 | 51760 | 3 | 2 | 31 | |
| GSE74704 | SYT17 | 51760 | 2 | 1 | 17 | |
| TCGA | SYT17 | 51760 | 20 | 12 | 64 |
Total number of gains: 97; Total number of losses: 45; Total Number of normals: 346.
Somatic mutations of SYT17:
Generating mutation plots.
Highly correlated genes for SYT17:
Showing top 20/190 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SYT17 | ZKSCAN5 | 0.763698 | 3 | 0 | 3 |
| SYT17 | PTGES3 | 0.748497 | 3 | 0 | 3 |
| SYT17 | MBOAT1 | 0.724948 | 3 | 0 | 3 |
| SYT17 | ARID2 | 0.721776 | 3 | 0 | 3 |
| SYT17 | ACTR6 | 0.721374 | 3 | 0 | 3 |
| SYT17 | MRPL38 | 0.71678 | 3 | 0 | 3 |
| SYT17 | ELF2 | 0.71487 | 3 | 0 | 3 |
| SYT17 | PMF1 | 0.712244 | 3 | 0 | 3 |
| SYT17 | RNF138 | 0.710105 | 3 | 0 | 3 |
| SYT17 | ITPRIPL2 | 0.708301 | 5 | 0 | 5 |
| SYT17 | PPP1CC | 0.701397 | 3 | 0 | 3 |
| SYT17 | VPS52 | 0.699361 | 3 | 0 | 3 |
| SYT17 | PRKCH | 0.695925 | 3 | 0 | 3 |
| SYT17 | SRP68 | 0.69585 | 3 | 0 | 3 |
| SYT17 | ZNF765 | 0.692094 | 3 | 0 | 3 |
| SYT17 | MAGEA6 | 0.691803 | 3 | 0 | 3 |
| SYT17 | COMMD7 | 0.68696 | 3 | 0 | 3 |
| SYT17 | SYNGR2 | 0.686626 | 3 | 0 | 3 |
| SYT17 | CHCHD5 | 0.683025 | 3 | 0 | 3 |
| SYT17 | LSM4 | 0.679492 | 3 | 0 | 3 |
For details and further investigation, click here
