CHCHD5

 

Full name: coiled-coil-helix-coiled-coil-helix domain containing 5 Alias Symbol: MGC11104|MIC14|MIX14
Type: protein-coding gene Cytoband: 2q14.1
Entrez ID: 84269 HGNC ID: HGNC:17840 Ensembl Gene: ENSG00000125611 OMIM ID: 616978
Drug and gene relationship at DGIdb

 

Expression of CHCHD5:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CHCHD5 84269 223479_s_at 0.0996 0.7916
GSE26886 CHCHD5 84269 223479_s_at 0.4339 0.0534
GSE45670 CHCHD5 84269 223479_s_at 0.1149 0.6494
GSE53622 CHCHD5 84269 62734 0.1141 0.1186
GSE53624 CHCHD5 84269 62734 0.1018 0.1545
GSE63941 CHCHD5 84269 223479_s_at 1.6229 0.0003
GSE77861 CHCHD5 84269 237993_at -0.1416 0.3077
GSE97050 CHCHD5 84269 A_24_P379727 0.2809 0.2734
SRP007169 CHCHD5 84269 RNAseq -0.6748 0.2236
SRP008496 CHCHD5 84269 RNAseq -0.4960 0.1518
SRP064894 CHCHD5 84269 RNAseq 0.3207 0.3967
SRP133303 CHCHD5 84269 RNAseq -0.2575 0.0666
SRP159526 CHCHD5 84269 RNAseq -0.0077 0.9826
SRP193095 CHCHD5 84269 RNAseq -0.3037 0.0349
SRP219564 CHCHD5 84269 RNAseq -0.2764 0.4664
TCGA CHCHD5 84269 RNAseq 0.0286 0.7505

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by CHCHD5 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CHCHD5:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CHCHD5 84269 6 2 22
GSE20123 CHCHD5 84269 6 2 22
GSE43470 CHCHD5 84269 3 1 39
GSE46452 CHCHD5 84269 1 4 54
GSE47630 CHCHD5 84269 7 0 33
GSE54993 CHCHD5 84269 0 6 64
GSE54994 CHCHD5 84269 10 0 43
GSE60625 CHCHD5 84269 0 3 8
GSE74703 CHCHD5 84269 3 1 32
GSE74704 CHCHD5 84269 3 2 15
TCGA CHCHD5 84269 31 6 59

Total number of gains: 70; Total number of losses: 27; Total Number of normals: 391.  


 

Somatic mutations of CHCHD5:

 

Generating mutation plots.

 

Highly correlated genes for CHCHD5:

 

Showing top 20/547 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CHCHD5RPP380.86229303
CHCHD5PRPS20.776842303
CHCHD5PTPN90.768731303
CHCHD5EARS20.761745303
CHCHD5USP30.757025303
CHCHD5POLA10.752601303
CHCHD5SF3B40.741589303
CHCHD5SLC25A400.733397303
CHCHD5CTCF0.730832403
CHCHD5BUB30.730754303
CHCHD5INPP5B0.728253303
CHCHD5FBXL190.726525303
CHCHD5FAM192A0.719266303
CHCHD5UBR70.717965303
CHCHD5SEMA4A0.715328303
CHCHD5KLHL110.713689303
CHCHD5FBRS0.711729403
CHCHD5LGALS80.71077303
CHCHD5UBE2N0.710416303
CHCHD5CELSR20.709174303

For details and further investigation, click here