| Full name: TAR (HIV-1) RNA binding protein 1 | Alias Symbol: TRP-185|TRM3|TRMT3 | ||
| Type: protein-coding gene | Cytoband: 1q42.2 | ||
| Entrez ID: 6894 | HGNC ID: HGNC:11568 | Ensembl Gene: ENSG00000059588 | OMIM ID: 605052 |
| Drug and gene relationship at DGIdb | |||
Expression of TARBP1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TARBP1 | 6894 | 202813_at | 0.6782 | 0.0392 | |
| GSE20347 | TARBP1 | 6894 | 202813_at | 0.8092 | 0.0000 | |
| GSE23400 | TARBP1 | 6894 | 202813_at | 0.4056 | 0.0000 | |
| GSE26886 | TARBP1 | 6894 | 202813_at | 0.4460 | 0.1245 | |
| GSE29001 | TARBP1 | 6894 | 202813_at | 0.5875 | 0.0050 | |
| GSE38129 | TARBP1 | 6894 | 202813_at | 0.9018 | 0.0000 | |
| GSE45670 | TARBP1 | 6894 | 202813_at | 0.1800 | 0.3839 | |
| GSE53622 | TARBP1 | 6894 | 27576 | 0.5675 | 0.0000 | |
| GSE53624 | TARBP1 | 6894 | 27576 | 0.4451 | 0.0000 | |
| GSE63941 | TARBP1 | 6894 | 202813_at | 0.5407 | 0.2463 | |
| GSE77861 | TARBP1 | 6894 | 202813_at | 0.4018 | 0.1328 | |
| GSE97050 | TARBP1 | 6894 | A_23_P52058 | 0.1803 | 0.4245 | |
| SRP007169 | TARBP1 | 6894 | RNAseq | 0.4309 | 0.2039 | |
| SRP008496 | TARBP1 | 6894 | RNAseq | 0.7299 | 0.0071 | |
| SRP064894 | TARBP1 | 6894 | RNAseq | 0.4602 | 0.0642 | |
| SRP133303 | TARBP1 | 6894 | RNAseq | 0.0771 | 0.6854 | |
| SRP159526 | TARBP1 | 6894 | RNAseq | 0.3819 | 0.3823 | |
| SRP193095 | TARBP1 | 6894 | RNAseq | 0.2616 | 0.0377 | |
| SRP219564 | TARBP1 | 6894 | RNAseq | 0.4404 | 0.1696 | |
| TCGA | TARBP1 | 6894 | RNAseq | 0.1988 | 0.0034 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by TARBP1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TARBP1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TARBP1 | 6894 | 10 | 0 | 20 | |
| GSE20123 | TARBP1 | 6894 | 11 | 0 | 19 | |
| GSE43470 | TARBP1 | 6894 | 9 | 0 | 34 | |
| GSE46452 | TARBP1 | 6894 | 4 | 2 | 53 | |
| GSE47630 | TARBP1 | 6894 | 15 | 0 | 25 | |
| GSE54993 | TARBP1 | 6894 | 0 | 6 | 64 | |
| GSE54994 | TARBP1 | 6894 | 16 | 0 | 37 | |
| GSE60625 | TARBP1 | 6894 | 0 | 0 | 11 | |
| GSE74703 | TARBP1 | 6894 | 9 | 0 | 27 | |
| GSE74704 | TARBP1 | 6894 | 5 | 0 | 15 | |
| TCGA | TARBP1 | 6894 | 44 | 3 | 49 |
Total number of gains: 123; Total number of losses: 11; Total Number of normals: 354.
Somatic mutations of TARBP1:
Generating mutation plots.
Highly correlated genes for TARBP1:
Showing top 20/1451 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TARBP1 | DUSP23 | 0.800808 | 3 | 0 | 3 |
| TARBP1 | MARS2 | 0.773328 | 3 | 0 | 3 |
| TARBP1 | YWHAG | 0.762778 | 3 | 0 | 3 |
| TARBP1 | ZFYVE27 | 0.759997 | 3 | 0 | 3 |
| TARBP1 | TMEM170A | 0.756302 | 3 | 0 | 3 |
| TARBP1 | LRRC58 | 0.730915 | 4 | 0 | 4 |
| TARBP1 | CDCA2 | 0.7257 | 3 | 0 | 3 |
| TARBP1 | TUBA1B | 0.722172 | 4 | 0 | 4 |
| TARBP1 | TNFAIP1 | 0.717245 | 4 | 0 | 3 |
| TARBP1 | BORA | 0.715924 | 8 | 0 | 7 |
| TARBP1 | TRUB1 | 0.714485 | 3 | 0 | 3 |
| TARBP1 | RNF4 | 0.712476 | 4 | 0 | 3 |
| TARBP1 | OAF | 0.707716 | 3 | 0 | 3 |
| TARBP1 | FLVCR1 | 0.707452 | 8 | 0 | 7 |
| TARBP1 | FAM86C1 | 0.70727 | 4 | 0 | 4 |
| TARBP1 | ZNF567 | 0.703994 | 3 | 0 | 3 |
| TARBP1 | SPIRE2 | 0.703789 | 3 | 0 | 3 |
| TARBP1 | KIF16B | 0.700424 | 4 | 0 | 3 |
| TARBP1 | PLEKHA8 | 0.699472 | 3 | 0 | 3 |
| TARBP1 | ZNF10 | 0.698842 | 3 | 0 | 3 |
For details and further investigation, click here
