TLX2

 

Full name: T cell leukemia homeobox 2 Alias Symbol: Enx|Tlx2|NCX
Type: protein-coding gene Cytoband: 2p13.1
Entrez ID: 3196 HGNC ID: HGNC:5057 Ensembl Gene: ENSG00000115297 OMIM ID: 604240
Drug and gene relationship at DGIdb

 

Expression of TLX2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TLX2 3196 211049_at -0.0949 0.7369
GSE20347 TLX2 3196 211049_at -0.0684 0.3386
GSE23400 TLX2 3196 211049_at -0.0775 0.0085
GSE26886 TLX2 3196 211049_at 0.2314 0.1366
GSE29001 TLX2 3196 211049_at 0.0536 0.7634
GSE38129 TLX2 3196 211049_at -0.1011 0.0892
GSE45670 TLX2 3196 211049_at -0.0003 0.9982
GSE53622 TLX2 3196 80327 0.5801 0.0001
GSE53624 TLX2 3196 80327 1.1031 0.0000
GSE63941 TLX2 3196 211049_at 0.0975 0.5865
GSE77861 TLX2 3196 211049_at -0.0157 0.9146
GSE97050 TLX2 3196 A_23_P389987 0.3201 0.3217
SRP159526 TLX2 3196 RNAseq 3.9139 0.0000
TCGA TLX2 3196 RNAseq 0.8278 0.0904

Upregulated datasets: 2; Downregulated datasets: 0.  


 

Survival by TLX2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of TLX2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TLX2 3196 9 2 19
GSE20123 TLX2 3196 10 2 18
GSE43470 TLX2 3196 4 0 39
GSE46452 TLX2 3196 2 3 54
GSE47630 TLX2 3196 7 0 33
GSE54993 TLX2 3196 0 6 64
GSE54994 TLX2 3196 10 0 43
GSE60625 TLX2 3196 0 3 8
GSE74703 TLX2 3196 4 0 32
GSE74704 TLX2 3196 8 0 12
TCGA TLX2 3196 37 2 57

Total number of gains: 91; Total number of losses: 18; Total Number of normals: 379.  


 

Somatic mutations of TLX2:

 

Generating mutation plots.

 

Highly correlated genes for TLX2:

 

Showing top 20/304 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TLX2CCDC1140.695742303
TLX2ABCC20.669716303
TLX2MGAT5B0.666295303
TLX2CLSTN30.660283303
TLX2POLM0.651315404
TLX2CLDN140.649797303
TLX2USHBP10.64705303
TLX2CATSPER30.641698303
TLX2TLR60.641258404
TLX2KCNA40.641123303
TLX2TPO0.637614404
TLX2WDR600.63702303
TLX2DNAI10.632196404
TLX2KIF170.631152404
TLX2RPP250.631012303
TLX2FEZF20.628804303
TLX2ZNF6390.624599403
TLX2KCNT10.622772403
TLX2EFNB10.620896504
TLX2GJA30.620117504

For details and further investigation, click here