| Full name: calsyntenin 3 | Alias Symbol: CSTN3|KIAA0726|CDHR14 | ||
| Type: protein-coding gene | Cytoband: 12p13.31 | ||
| Entrez ID: 9746 | HGNC ID: HGNC:18371 | Ensembl Gene: ENSG00000139182 | OMIM ID: 611324 |
| Drug and gene relationship at DGIdb | |||
Expression of CLSTN3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CLSTN3 | 9746 | 204375_at | 0.3995 | 0.2797 | |
| GSE20347 | CLSTN3 | 9746 | 204375_at | 0.1384 | 0.1132 | |
| GSE23400 | CLSTN3 | 9746 | 204375_at | 0.0934 | 0.0357 | |
| GSE26886 | CLSTN3 | 9746 | 204375_at | 0.2467 | 0.0212 | |
| GSE29001 | CLSTN3 | 9746 | 204375_at | 0.0550 | 0.8045 | |
| GSE38129 | CLSTN3 | 9746 | 204375_at | -0.0159 | 0.8627 | |
| GSE45670 | CLSTN3 | 9746 | 204375_at | 0.0551 | 0.6083 | |
| GSE53622 | CLSTN3 | 9746 | 19091 | -0.0008 | 0.9903 | |
| GSE53624 | CLSTN3 | 9746 | 19091 | -0.0283 | 0.6852 | |
| GSE63941 | CLSTN3 | 9746 | 204375_at | 0.4108 | 0.2423 | |
| GSE77861 | CLSTN3 | 9746 | 204375_at | 0.1907 | 0.3305 | |
| GSE97050 | CLSTN3 | 9746 | A_33_P3269803 | -0.1294 | 0.4856 | |
| SRP007169 | CLSTN3 | 9746 | RNAseq | 2.3494 | 0.0001 | |
| SRP008496 | CLSTN3 | 9746 | RNAseq | 2.4736 | 0.0000 | |
| SRP064894 | CLSTN3 | 9746 | RNAseq | 1.1585 | 0.0000 | |
| SRP133303 | CLSTN3 | 9746 | RNAseq | 0.4540 | 0.0669 | |
| SRP159526 | CLSTN3 | 9746 | RNAseq | 0.9086 | 0.0064 | |
| SRP193095 | CLSTN3 | 9746 | RNAseq | 1.2868 | 0.0000 | |
| SRP219564 | CLSTN3 | 9746 | RNAseq | 1.1934 | 0.0025 | |
| TCGA | CLSTN3 | 9746 | RNAseq | 0.1469 | 0.0265 |
Upregulated datasets: 5; Downregulated datasets: 0.
Survival by CLSTN3 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CLSTN3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CLSTN3 | 9746 | 7 | 3 | 20 | |
| GSE20123 | CLSTN3 | 9746 | 7 | 3 | 20 | |
| GSE43470 | CLSTN3 | 9746 | 8 | 3 | 32 | |
| GSE46452 | CLSTN3 | 9746 | 10 | 1 | 48 | |
| GSE47630 | CLSTN3 | 9746 | 12 | 2 | 26 | |
| GSE54993 | CLSTN3 | 9746 | 1 | 10 | 59 | |
| GSE54994 | CLSTN3 | 9746 | 10 | 2 | 41 | |
| GSE60625 | CLSTN3 | 9746 | 0 | 1 | 10 | |
| GSE74703 | CLSTN3 | 9746 | 7 | 2 | 27 | |
| GSE74704 | CLSTN3 | 9746 | 4 | 2 | 14 | |
| TCGA | CLSTN3 | 9746 | 40 | 6 | 50 |
Total number of gains: 106; Total number of losses: 35; Total Number of normals: 347.
Somatic mutations of CLSTN3:
Generating mutation plots.
Highly correlated genes for CLSTN3:
Showing top 20/494 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CLSTN3 | TBX21 | 0.793039 | 3 | 0 | 3 |
| CLSTN3 | PRSS38 | 0.770969 | 3 | 0 | 3 |
| CLSTN3 | TSSK3 | 0.765739 | 3 | 0 | 3 |
| CLSTN3 | ZNF182 | 0.762953 | 4 | 0 | 4 |
| CLSTN3 | OR2B11 | 0.762054 | 3 | 0 | 3 |
| CLSTN3 | ADCY1 | 0.75096 | 3 | 0 | 3 |
| CLSTN3 | PRR18 | 0.749182 | 3 | 0 | 3 |
| CLSTN3 | LYZL2 | 0.748084 | 3 | 0 | 3 |
| CLSTN3 | OR2H1 | 0.74615 | 3 | 0 | 3 |
| CLSTN3 | KCNH3 | 0.73928 | 3 | 0 | 3 |
| CLSTN3 | C19orf25 | 0.736995 | 3 | 0 | 3 |
| CLSTN3 | TTC21A | 0.73499 | 3 | 0 | 3 |
| CLSTN3 | SLC19A3 | 0.734617 | 3 | 0 | 3 |
| CLSTN3 | ISLR2 | 0.733877 | 4 | 0 | 4 |
| CLSTN3 | FOXE3 | 0.730288 | 3 | 0 | 3 |
| CLSTN3 | ESRRA | 0.727265 | 3 | 0 | 3 |
| CLSTN3 | SIGIRR | 0.724554 | 4 | 0 | 3 |
| CLSTN3 | SCUBE1 | 0.724353 | 4 | 0 | 4 |
| CLSTN3 | ZIC1 | 0.722282 | 3 | 0 | 3 |
| CLSTN3 | HCRTR1 | 0.721969 | 4 | 0 | 4 |
For details and further investigation, click here
