TMEM168

 

Full name: transmembrane protein 168 Alias Symbol: DKFZp564C012|FLJ13576
Type: protein-coding gene Cytoband: 7q31.1
Entrez ID: 64418 HGNC ID: HGNC:25826 Ensembl Gene: ENSG00000146802 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of TMEM168:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TMEM168 64418 218962_s_at 0.0239 0.9779
GSE20347 TMEM168 64418 218962_s_at -0.3056 0.0560
GSE23400 TMEM168 64418 218962_s_at -0.1099 0.1994
GSE26886 TMEM168 64418 218962_s_at -0.3100 0.2253
GSE29001 TMEM168 64418 218962_s_at -0.2067 0.5722
GSE38129 TMEM168 64418 218962_s_at -0.0851 0.6206
GSE45670 TMEM168 64418 218962_s_at -0.2805 0.1159
GSE53622 TMEM168 64418 17189 -0.3396 0.0006
GSE53624 TMEM168 64418 17189 -0.4266 0.0000
GSE63941 TMEM168 64418 218962_s_at -0.5796 0.2307
GSE77861 TMEM168 64418 218962_s_at -0.3516 0.2780
GSE97050 TMEM168 64418 A_24_P414952 0.0461 0.8301
SRP007169 TMEM168 64418 RNAseq -0.5079 0.1423
SRP008496 TMEM168 64418 RNAseq -0.2865 0.0705
SRP064894 TMEM168 64418 RNAseq -0.5053 0.0009
SRP133303 TMEM168 64418 RNAseq -0.3046 0.0231
SRP159526 TMEM168 64418 RNAseq -0.7564 0.0023
SRP193095 TMEM168 64418 RNAseq -0.4209 0.0024
SRP219564 TMEM168 64418 RNAseq -0.4191 0.2811
TCGA TMEM168 64418 RNAseq -0.0655 0.3601

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by TMEM168 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of TMEM168:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TMEM168 64418 10 2 18
GSE20123 TMEM168 64418 11 2 17
GSE43470 TMEM168 64418 5 2 36
GSE46452 TMEM168 64418 8 1 50
GSE47630 TMEM168 64418 7 4 29
GSE54993 TMEM168 64418 2 8 60
GSE54994 TMEM168 64418 12 5 36
GSE60625 TMEM168 64418 0 0 11
GSE74703 TMEM168 64418 5 2 29
GSE74704 TMEM168 64418 7 2 11
TCGA TMEM168 64418 36 16 44

Total number of gains: 103; Total number of losses: 44; Total Number of normals: 341.  


 

Somatic mutations of TMEM168:

 

Generating mutation plots.

 

Highly correlated genes for TMEM168:

 

Showing top 20/413 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TMEM168NUB10.736419303
TMEM168ZNF1400.729806403
TMEM168ZNF1000.728706303
TMEM168ZXDA0.717987303
TMEM168DNAJC210.714373303
TMEM168GTF2A10.699234303
TMEM168YIPF30.698753403
TMEM168ABHD16A0.697536303
TMEM168GCC10.69139403
TMEM168UBE2N0.687044303
TMEM168ZNF1240.683734303
TMEM168LTN10.682073404
TMEM168PTGER40.680561303
TMEM168UNC5CL0.675101303
TMEM168C6orf1360.668493403
TMEM168ASTE10.665898403
TMEM168FAM221A0.664514404
TMEM168ERCC60.662443403
TMEM168STAG10.661142505
TMEM168ZNF2660.660229403

For details and further investigation, click here