TMEM175

 

Full name: transmembrane protein 175 Alias Symbol: MGC4618
Type: protein-coding gene Cytoband: 4p16.3
Entrez ID: 84286 HGNC ID: HGNC:28709 Ensembl Gene: ENSG00000127419 OMIM ID: 616660
Drug and gene relationship at DGIdb

 

Expression of TMEM175:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TMEM175 84286 223462_at -0.0430 0.9073
GSE26886 TMEM175 84286 223462_at -0.3458 0.0087
GSE45670 TMEM175 84286 223462_at -0.0758 0.4154
GSE53622 TMEM175 84286 20344 -0.3466 0.0000
GSE53624 TMEM175 84286 20344 -0.3999 0.0000
GSE63941 TMEM175 84286 223462_at -0.0926 0.7211
GSE77861 TMEM175 84286 223462_at -0.1259 0.3673
GSE97050 TMEM175 84286 A_33_P3293266 -0.1066 0.5726
SRP007169 TMEM175 84286 RNAseq -0.7058 0.0995
SRP008496 TMEM175 84286 RNAseq -1.1401 0.0007
SRP064894 TMEM175 84286 RNAseq 0.4357 0.1259
SRP133303 TMEM175 84286 RNAseq -0.3152 0.1365
SRP159526 TMEM175 84286 RNAseq -0.3458 0.2951
SRP193095 TMEM175 84286 RNAseq -0.1637 0.3213
SRP219564 TMEM175 84286 RNAseq 0.1708 0.6233
TCGA TMEM175 84286 RNAseq -0.2359 0.0006

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by TMEM175 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of TMEM175:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TMEM175 84286 0 17 13
GSE20123 TMEM175 84286 0 15 15
GSE43470 TMEM175 84286 0 17 26
GSE46452 TMEM175 84286 1 36 22
GSE47630 TMEM175 84286 2 19 19
GSE54993 TMEM175 84286 11 0 59
GSE54994 TMEM175 84286 3 12 38
GSE60625 TMEM175 84286 0 0 11
GSE74703 TMEM175 84286 0 13 23
GSE74704 TMEM175 84286 0 8 12
TCGA TMEM175 84286 9 47 40

Total number of gains: 26; Total number of losses: 184; Total Number of normals: 278.  


 

Somatic mutations of TMEM175:

 

Generating mutation plots.

 

Highly correlated genes for TMEM175:

 

Showing top 20/47 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TMEM175TBKBP10.700351303
TMEM175MVK0.685838303
TMEM175SEMA6C0.683107303
TMEM175KRTAP5-AS10.64864303
TMEM175CCDC1530.623282403
TMEM175ARSF0.619818303
TMEM175CALCOCO10.611701404
TMEM175TEF0.6089303
TMEM175MAGI30.606379303
TMEM175ACADS0.600388303
TMEM175TOLLIP0.596418303
TMEM175CORIN0.595842303
TMEM175MOB20.595373403
TMEM175NRAP0.58489303
TMEM175FAM107A0.582385403
TMEM175CACFD10.581629503
TMEM175OPRD10.580921403
TMEM175CD40LG0.58092403
TMEM175NDUFC10.571324403
TMEM175CST30.564397403

For details and further investigation, click here