TMEM229B

 

Full name: transmembrane protein 229B Alias Symbol: FLJ33387
Type: protein-coding gene Cytoband: 14q23.3-q24.1
Entrez ID: 161145 HGNC ID: HGNC:20130 Ensembl Gene: ENSG00000198133 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of TMEM229B:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TMEM229B 161145 227544_at 0.1402 0.6051
GSE26886 TMEM229B 161145 227544_at 0.1850 0.2314
GSE45670 TMEM229B 161145 227544_at 0.1155 0.3923
GSE53622 TMEM229B 161145 163571 0.4242 0.0139
GSE53624 TMEM229B 161145 163571 0.6477 0.0000
GSE63941 TMEM229B 161145 227544_at 0.1207 0.6603
GSE77861 TMEM229B 161145 227544_at -0.1197 0.1799
GSE97050 TMEM229B 161145 A_33_P3355014 0.1873 0.6209
SRP007169 TMEM229B 161145 RNAseq 0.7824 0.3170
SRP064894 TMEM229B 161145 RNAseq 0.8889 0.0067
SRP133303 TMEM229B 161145 RNAseq 1.0916 0.0097
SRP159526 TMEM229B 161145 RNAseq 0.4107 0.4096
SRP193095 TMEM229B 161145 RNAseq 0.1163 0.7595
SRP219564 TMEM229B 161145 RNAseq 1.7303 0.0458
TCGA TMEM229B 161145 RNAseq -0.0851 0.7009

Upregulated datasets: 2; Downregulated datasets: 0.  


 

Survival by TMEM229B expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of TMEM229B:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TMEM229B 161145 7 2 21
GSE20123 TMEM229B 161145 7 2 21
GSE43470 TMEM229B 161145 8 2 33
GSE46452 TMEM229B 161145 16 3 40
GSE47630 TMEM229B 161145 11 9 20
GSE54993 TMEM229B 161145 3 9 58
GSE54994 TMEM229B 161145 18 5 30
GSE60625 TMEM229B 161145 0 2 9
GSE74703 TMEM229B 161145 7 2 27
GSE74704 TMEM229B 161145 3 2 15
TCGA TMEM229B 161145 33 14 49

Total number of gains: 113; Total number of losses: 52; Total Number of normals: 323.  


 

Somatic mutations of TMEM229B:

 

Generating mutation plots.

 

Highly correlated genes for TMEM229B:

 

Showing top 20/145 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TMEM229BSPI10.704215404
TMEM229BCD40.70041303
TMEM229BRSAD20.681411303
TMEM229BSERPING10.676806303
TMEM229BABHD16B0.668768303
TMEM229BLILRB10.668586404
TMEM229BPLEK0.661902303
TMEM229BFANCC0.660219303
TMEM229BATP2A30.654365303
TMEM229BPVRIG0.653682303
TMEM229BDHX580.648064403
TMEM229BIFITM20.647806303
TMEM229BTEAD40.643148303
TMEM229BVCAM10.634179303
TMEM229BETS10.632997403
TMEM229BTRPV20.632201606
TMEM229BCOL23A10.631874403
TMEM229BTMEM1730.629915503
TMEM229BGNG50.629721303
TMEM229BRBP20.627954303

For details and further investigation, click here