| Full name: TMPO antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 12q23.1 | ||
| Entrez ID: 100128191 | HGNC ID: HGNC:44158 | Ensembl Gene: ENSG00000257167 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of TMPO-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TMPO-AS1 | 100128191 | 227578_at | 0.6171 | 0.0776 | |
| GSE26886 | TMPO-AS1 | 100128191 | 227578_at | 0.3600 | 0.0169 | |
| GSE45670 | TMPO-AS1 | 100128191 | 227578_at | 0.3159 | 0.0811 | |
| GSE53622 | TMPO-AS1 | 100128191 | 34279 | 0.7120 | 0.0000 | |
| GSE53624 | TMPO-AS1 | 100128191 | 34279 | 0.3992 | 0.0001 | |
| GSE63941 | TMPO-AS1 | 100128191 | 227578_at | 1.9592 | 0.0058 | |
| GSE77861 | TMPO-AS1 | 100128191 | 227578_at | 0.0822 | 0.3953 | |
| SRP064894 | TMPO-AS1 | 100128191 | RNAseq | 1.4013 | 0.0000 | |
| SRP133303 | TMPO-AS1 | 100128191 | RNAseq | 0.8693 | 0.0256 | |
| SRP159526 | TMPO-AS1 | 100128191 | RNAseq | 1.5720 | 0.0006 | |
| SRP193095 | TMPO-AS1 | 100128191 | RNAseq | 0.6135 | 0.0000 | |
| SRP219564 | TMPO-AS1 | 100128191 | RNAseq | 0.6882 | 0.1387 |
Upregulated datasets: 3; Downregulated datasets: 0.
Survival by TMPO-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of TMPO-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TMPO-AS1 | 100128191 | 2 | 3 | 25 | |
| GSE20123 | TMPO-AS1 | 100128191 | 2 | 3 | 25 | |
| GSE43470 | TMPO-AS1 | 100128191 | 2 | 0 | 41 | |
| GSE46452 | TMPO-AS1 | 100128191 | 9 | 1 | 49 | |
| GSE47630 | TMPO-AS1 | 100128191 | 9 | 2 | 29 | |
| GSE54993 | TMPO-AS1 | 100128191 | 0 | 5 | 65 | |
| GSE54994 | TMPO-AS1 | 100128191 | 4 | 2 | 47 | |
| GSE60625 | TMPO-AS1 | 100128191 | 0 | 0 | 11 | |
| GSE74703 | TMPO-AS1 | 100128191 | 2 | 0 | 34 | |
| GSE74704 | TMPO-AS1 | 100128191 | 1 | 2 | 17 |
Total number of gains: 31; Total number of losses: 18; Total Number of normals: 343.
Somatic mutations of TMPO-AS1:
Generating mutation plots.
Highly correlated genes for TMPO-AS1:
Showing top 20/393 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TMPO-AS1 | TMEM63B | 0.737968 | 3 | 0 | 3 |
| TMPO-AS1 | CIB3 | 0.731953 | 3 | 0 | 3 |
| TMPO-AS1 | SZT2 | 0.721296 | 3 | 0 | 3 |
| TMPO-AS1 | LINC00454 | 0.717096 | 3 | 0 | 3 |
| TMPO-AS1 | DAXX | 0.715109 | 3 | 0 | 3 |
| TMPO-AS1 | LIN28A | 0.702225 | 3 | 0 | 3 |
| TMPO-AS1 | CUX1 | 0.700972 | 3 | 0 | 3 |
| TMPO-AS1 | RANGAP1 | 0.697559 | 3 | 0 | 3 |
| TMPO-AS1 | CHAF1A | 0.683346 | 5 | 0 | 4 |
| TMPO-AS1 | ATXN2L | 0.679101 | 3 | 0 | 3 |
| TMPO-AS1 | SLC25A1 | 0.678043 | 3 | 0 | 3 |
| TMPO-AS1 | TRRAP | 0.676999 | 3 | 0 | 3 |
| TMPO-AS1 | RHBDD3 | 0.67467 | 3 | 0 | 3 |
| TMPO-AS1 | DSCR10 | 0.669043 | 3 | 0 | 3 |
| TMPO-AS1 | KLF16 | 0.660564 | 3 | 0 | 3 |
| TMPO-AS1 | BRF1 | 0.659319 | 4 | 0 | 3 |
| TMPO-AS1 | ZNF213-AS1 | 0.659081 | 3 | 0 | 3 |
| TMPO-AS1 | CDT1 | 0.657283 | 5 | 0 | 4 |
| TMPO-AS1 | SLC52A1 | 0.657177 | 5 | 0 | 4 |
| TMPO-AS1 | TNFAIP8L1 | 0.655489 | 7 | 0 | 6 |
For details and further investigation, click here
