| Full name: TNF receptor superfamily member 17 | Alias Symbol: BCM|CD269|TNFRSF13A | ||
| Type: protein-coding gene | Cytoband: 16p13.13 | ||
| Entrez ID: 608 | HGNC ID: HGNC:11913 | Ensembl Gene: ENSG00000048462 | OMIM ID: 109545 |
| Drug and gene relationship at DGIdb | |||
Expression of TNFRSF17:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TNFRSF17 | 608 | 206641_at | -0.4194 | 0.8150 | |
| GSE20347 | TNFRSF17 | 608 | 206641_at | 0.1896 | 0.3041 | |
| GSE23400 | TNFRSF17 | 608 | 206641_at | -0.0431 | 0.3547 | |
| GSE26886 | TNFRSF17 | 608 | 206641_at | -0.1247 | 0.4529 | |
| GSE29001 | TNFRSF17 | 608 | 206641_at | 0.0753 | 0.6193 | |
| GSE38129 | TNFRSF17 | 608 | 206641_at | 0.3017 | 0.3570 | |
| GSE45670 | TNFRSF17 | 608 | 206641_at | -0.3246 | 0.6158 | |
| GSE53622 | TNFRSF17 | 608 | 100942 | -0.2555 | 0.4379 | |
| GSE53624 | TNFRSF17 | 608 | 100942 | -0.8729 | 0.0054 | |
| GSE63941 | TNFRSF17 | 608 | 206641_at | -0.1022 | 0.4712 | |
| GSE77861 | TNFRSF17 | 608 | 206641_at | 0.1158 | 0.2973 | |
| GSE97050 | TNFRSF17 | 608 | A_23_P37736 | 0.2194 | 0.3428 | |
| SRP133303 | TNFRSF17 | 608 | RNAseq | -0.6089 | 0.0682 | |
| TCGA | TNFRSF17 | 608 | RNAseq | -1.2656 | 0.0095 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by TNFRSF17 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TNFRSF17:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TNFRSF17 | 608 | 4 | 4 | 22 | |
| GSE20123 | TNFRSF17 | 608 | 4 | 3 | 23 | |
| GSE43470 | TNFRSF17 | 608 | 3 | 3 | 37 | |
| GSE46452 | TNFRSF17 | 608 | 38 | 1 | 20 | |
| GSE47630 | TNFRSF17 | 608 | 14 | 6 | 20 | |
| GSE54993 | TNFRSF17 | 608 | 3 | 5 | 62 | |
| GSE54994 | TNFRSF17 | 608 | 5 | 9 | 39 | |
| GSE60625 | TNFRSF17 | 608 | 4 | 0 | 7 | |
| GSE74703 | TNFRSF17 | 608 | 3 | 2 | 31 | |
| GSE74704 | TNFRSF17 | 608 | 2 | 1 | 17 | |
| TCGA | TNFRSF17 | 608 | 22 | 12 | 62 |
Total number of gains: 102; Total number of losses: 46; Total Number of normals: 340.
Somatic mutations of TNFRSF17:
Generating mutation plots.
Highly correlated genes for TNFRSF17:
Showing top 20/232 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TNFRSF17 | POU2AF1 | 0.782425 | 4 | 0 | 4 |
| TNFRSF17 | FCRL5 | 0.760925 | 5 | 0 | 5 |
| TNFRSF17 | CD27 | 0.750059 | 8 | 0 | 8 |
| TNFRSF17 | MZB1 | 0.743645 | 10 | 0 | 9 |
| TNFRSF17 | RAB39B | 0.709881 | 4 | 0 | 4 |
| TNFRSF17 | C16orf54 | 0.699901 | 6 | 0 | 5 |
| TNFRSF17 | LAX1 | 0.699255 | 11 | 0 | 11 |
| TNFRSF17 | CD79A | 0.698308 | 10 | 0 | 8 |
| TNFRSF17 | IGK | 0.697175 | 6 | 0 | 5 |
| TNFRSF17 | PIK3CG | 0.692331 | 7 | 0 | 6 |
| TNFRSF17 | TLR10 | 0.686819 | 4 | 0 | 3 |
| TNFRSF17 | LINC00892 | 0.675327 | 3 | 0 | 3 |
| TNFRSF17 | PSMB8-AS1 | 0.670568 | 3 | 0 | 3 |
| TNFRSF17 | SLAMF6 | 0.665261 | 6 | 0 | 5 |
| TNFRSF17 | TPSAB1 | 0.661105 | 3 | 0 | 3 |
| TNFRSF17 | BTLA | 0.657166 | 6 | 0 | 5 |
| TNFRSF17 | SEC11C | 0.652538 | 5 | 0 | 5 |
| TNFRSF17 | TIFAB | 0.651031 | 3 | 0 | 3 |
| TNFRSF17 | CD180 | 0.647584 | 8 | 0 | 5 |
| TNFRSF17 | CD48 | 0.646088 | 10 | 0 | 8 |
For details and further investigation, click here
