| Full name: RP9 pre-mRNA splicing factor | Alias Symbol: PAP-1 | ||
| Type: protein-coding gene | Cytoband: 7p14.3 | ||
| Entrez ID: 6100 | HGNC ID: HGNC:10288 | Ensembl Gene: ENSG00000164610 | OMIM ID: 607331 |
| Drug and gene relationship at DGIdb | |||
Expression of RP9:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RP9 | 6100 | 227852_at | 0.4211 | 0.4736 | |
| GSE26886 | RP9 | 6100 | 227852_at | 1.6009 | 0.0000 | |
| GSE45670 | RP9 | 6100 | 227852_at | 0.4432 | 0.0028 | |
| GSE53622 | RP9 | 6100 | 18316 | 0.4454 | 0.0000 | |
| GSE53624 | RP9 | 6100 | 18316 | 0.6712 | 0.0000 | |
| GSE63941 | RP9 | 6100 | 227852_at | -0.5292 | 0.3705 | |
| GSE77861 | RP9 | 6100 | 227852_at | 0.4121 | 0.0857 | |
| GSE97050 | RP9 | 6100 | A_23_P255215 | -0.1166 | 0.6618 | |
| SRP007169 | RP9 | 6100 | RNAseq | 0.4471 | 0.3436 | |
| SRP008496 | RP9 | 6100 | RNAseq | 1.1228 | 0.0111 | |
| SRP064894 | RP9 | 6100 | RNAseq | 1.1869 | 0.0005 | |
| SRP133303 | RP9 | 6100 | RNAseq | 0.4936 | 0.0001 | |
| SRP159526 | RP9 | 6100 | RNAseq | 0.8845 | 0.0196 | |
| SRP193095 | RP9 | 6100 | RNAseq | 0.5950 | 0.0001 | |
| SRP219564 | RP9 | 6100 | RNAseq | 0.3571 | 0.3687 | |
| TCGA | RP9 | 6100 | RNAseq | 0.1480 | 0.0817 |
Upregulated datasets: 3; Downregulated datasets: 0.
Survival by RP9 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RP9:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RP9 | 6100 | 16 | 0 | 14 | |
| GSE20123 | RP9 | 6100 | 16 | 0 | 14 | |
| GSE43470 | RP9 | 6100 | 4 | 1 | 38 | |
| GSE46452 | RP9 | 6100 | 11 | 1 | 47 | |
| GSE47630 | RP9 | 6100 | 8 | 1 | 31 | |
| GSE54993 | RP9 | 6100 | 0 | 7 | 63 | |
| GSE54994 | RP9 | 6100 | 20 | 2 | 31 | |
| GSE60625 | RP9 | 6100 | 0 | 0 | 11 | |
| GSE74703 | RP9 | 6100 | 4 | 1 | 31 | |
| GSE74704 | RP9 | 6100 | 10 | 0 | 10 | |
| TCGA | RP9 | 6100 | 55 | 7 | 34 |
Total number of gains: 144; Total number of losses: 20; Total Number of normals: 324.
Somatic mutations of RP9:
Generating mutation plots.
Highly correlated genes for RP9:
Showing top 20/1243 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RP9 | PKNOX1 | 0.823819 | 3 | 0 | 3 |
| RP9 | CEP68 | 0.81392 | 3 | 0 | 3 |
| RP9 | GGPS1 | 0.810992 | 3 | 0 | 3 |
| RP9 | NAP1L1 | 0.808536 | 3 | 0 | 3 |
| RP9 | AIMP2 | 0.801528 | 4 | 0 | 4 |
| RP9 | DDX54 | 0.795398 | 3 | 0 | 3 |
| RP9 | CLASRP | 0.795313 | 3 | 0 | 3 |
| RP9 | PACSIN3 | 0.79506 | 3 | 0 | 3 |
| RP9 | TIPRL | 0.787841 | 3 | 0 | 3 |
| RP9 | PTOV1 | 0.78486 | 3 | 0 | 3 |
| RP9 | CWC22 | 0.783836 | 3 | 0 | 3 |
| RP9 | MAGOHB | 0.77964 | 4 | 0 | 4 |
| RP9 | TOMM40L | 0.778228 | 3 | 0 | 3 |
| RP9 | STON1 | 0.776052 | 3 | 0 | 3 |
| RP9 | FAM168A | 0.774773 | 3 | 0 | 3 |
| RP9 | NBAS | 0.774238 | 3 | 0 | 3 |
| RP9 | CCS | 0.774096 | 3 | 0 | 3 |
| RP9 | C20orf194 | 0.772617 | 3 | 0 | 3 |
| RP9 | ASB7 | 0.77111 | 3 | 0 | 3 |
| RP9 | TOMM20 | 0.768192 | 3 | 0 | 3 |
For details and further investigation, click here
