TRABD2A

 

Full name: TraB domain containing 2A Alias Symbol: TIKI1
Type: protein-coding gene Cytoband: 2p11.2
Entrez ID: 129293 HGNC ID: HGNC:27013 Ensembl Gene: ENSG00000186854 OMIM ID: 614912
Drug and gene relationship at DGIdb

 

Expression of TRABD2A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TRABD2A 129293 227867_at 0.0709 0.8251
GSE26886 TRABD2A 129293 227867_at 0.1241 0.5603
GSE45670 TRABD2A 129293 227867_at 0.1823 0.2656
GSE53622 TRABD2A 129293 95173 -0.2093 0.0509
GSE53624 TRABD2A 129293 68213 0.3410 0.0105
GSE63941 TRABD2A 129293 227867_at -1.0142 0.0012
GSE77861 TRABD2A 129293 231429_at -0.0615 0.7052
SRP064894 TRABD2A 129293 RNAseq 1.5729 0.0000
SRP133303 TRABD2A 129293 RNAseq 0.0995 0.6701
SRP159526 TRABD2A 129293 RNAseq -0.9418 0.2479
SRP193095 TRABD2A 129293 RNAseq 0.1461 0.6976
SRP219564 TRABD2A 129293 RNAseq -0.7048 0.2140

Upregulated datasets: 1; Downregulated datasets: 1.  


 

Survival by TRABD2A expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  


Copy number change of TRABD2A:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TRABD2A 129293 9 2 19
GSE20123 TRABD2A 129293 9 2 19
GSE43470 TRABD2A 129293 4 2 37
GSE46452 TRABD2A 129293 2 3 54
GSE47630 TRABD2A 129293 7 0 33
GSE54993 TRABD2A 129293 0 6 64
GSE54994 TRABD2A 129293 10 1 42
GSE60625 TRABD2A 129293 0 3 8
GSE74703 TRABD2A 129293 4 1 31
GSE74704 TRABD2A 129293 7 0 13
TCGA TRABD2A 129293 36 3 57

Total number of gains: 88; Total number of losses: 23; Total Number of normals: 377.  


 

Somatic mutations of TRABD2A:

 

Generating mutation plots.

 

Highly correlated genes for TRABD2A:

 

Showing top 20/80 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TRABD2ACAMK40.701147303
TRABD2AMAP1A0.695793303
TRABD2AMSC0.695365303
TRABD2APDE4B0.686969303
TRABD2ATPSG10.677552303
TRABD2ATEKT10.669475303
TRABD2AKLK140.650021303
TRABD2AMMP240.647796303
TRABD2AHAS20.643695303
TRABD2AENHO0.642351303
TRABD2ARAB33A0.637142303
TRABD2AEVA1B0.636918403
TRABD2ABHMT20.636125303
TRABD2AFBXL180.63578303
TRABD2AA1BG0.634395404
TRABD2ACCRL20.63301303
TRABD2AMCHR10.631832303
TRABD2ATNNI30.631743303
TRABD2AGNGT20.631216303
TRABD2AGRIN3B0.627946303

For details and further investigation, click here