TRIM24

 

Full name: tripartite motif containing 24 Alias Symbol: hTIF1|Tif1a|RNF82|TIF1A
Type: protein-coding gene Cytoband: 7q33-q34
Entrez ID: 8805 HGNC ID: HGNC:11812 Ensembl Gene: ENSG00000122779 OMIM ID: 603406
Drug and gene relationship at DGIdb

 

Expression of TRIM24:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TRIM24 8805 213301_x_at -0.3056 0.7041
GSE20347 TRIM24 8805 213301_x_at -0.2049 0.2874
GSE23400 TRIM24 8805 204391_x_at -0.0877 0.2713
GSE26886 TRIM24 8805 204391_x_at -0.0679 0.8615
GSE29001 TRIM24 8805 204391_x_at -0.5750 0.0511
GSE38129 TRIM24 8805 204391_x_at -0.0144 0.9367
GSE45670 TRIM24 8805 204391_x_at -0.0867 0.7553
GSE53622 TRIM24 8805 47062 -0.4613 0.0000
GSE53624 TRIM24 8805 40616 -0.4651 0.0000
GSE63941 TRIM24 8805 213301_x_at 0.5339 0.3464
GSE77861 TRIM24 8805 204391_x_at -0.3026 0.2785
GSE97050 TRIM24 8805 A_23_P93629 0.0429 0.8694
SRP007169 TRIM24 8805 RNAseq 0.9765 0.1205
SRP008496 TRIM24 8805 RNAseq 0.4560 0.2800
SRP064894 TRIM24 8805 RNAseq -0.5154 0.0030
SRP133303 TRIM24 8805 RNAseq -0.0254 0.9140
SRP159526 TRIM24 8805 RNAseq -0.1695 0.4773
SRP193095 TRIM24 8805 RNAseq -0.4114 0.0011
SRP219564 TRIM24 8805 RNAseq -0.6120 0.1096
TCGA TRIM24 8805 RNAseq -0.1171 0.0919

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by TRIM24 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of TRIM24:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TRIM24 8805 4 2 24
GSE20123 TRIM24 8805 4 2 24
GSE43470 TRIM24 8805 2 3 38
GSE46452 TRIM24 8805 7 2 50
GSE47630 TRIM24 8805 7 4 29
GSE54993 TRIM24 8805 3 5 62
GSE54994 TRIM24 8805 6 8 39
GSE60625 TRIM24 8805 0 0 11
GSE74703 TRIM24 8805 2 3 31
GSE74704 TRIM24 8805 1 2 17
TCGA TRIM24 8805 28 23 45

Total number of gains: 64; Total number of losses: 54; Total Number of normals: 370.  


 

Somatic mutations of TRIM24:

 

Generating mutation plots.

 

Highly correlated genes for TRIM24:

 

Showing top 20/176 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TRIM24BTBD100.799897303
TRIM24SHOC20.700049303
TRIM24PRSS80.643713403
TRIM24SOCS60.623964403
TRIM24TJP20.610213604
TRIM24TMEM1540.609303403
TRIM24RASGEF1C0.596978303
TRIM24ZNF300.594893403
TRIM24HMGCR0.59362504
TRIM24UBN20.592083403
TRIM24PTPN130.589155404
TRIM24ZNF6240.588936303
TRIM24CAPNS20.585756303
TRIM24STX190.584227605
TRIM24ZNF512B0.58305403
TRIM24PEX10.581387706
TRIM24TMEM30B0.581259403
TRIM24STOX20.578417504
TRIM24NSDHL0.578168504
TRIM24SLC9A3R10.578047804

For details and further investigation, click here